Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
RAB40ALP0C0E4 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC13.78□□□□□ -0.2
RAB40ALP0C0E4 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
RAB40ALP0C0E4 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RAB40ALP0C0E4 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC13.78□□□□□ -0.2
RAB40ALP0C0E4 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC13.78□□□□□ -0.2
RAB40ALP0C0E4 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RAB40ALP0C0E4 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC13.78□□□□□ -0.2
RAB40ALP0C0E4 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RAB40ALP0C0E4 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC13.78□□□□□ -0.2
RAB40ALP0C0E4 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RAB40ALP0C0E4 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
RAB40ALP0C0E4 HNRNPA1P27-201ENST00000412087 955 ntBASIC13.78□□□□□ -0.2
RAB40ALP0C0E4 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC13.78□□□□□ -0.2
RAB40ALP0C0E4 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC13.78□□□□□ -0.2
RAB40ALP0C0E4 RN7SL258P-201ENST00000478664 300 ntBASIC13.78□□□□□ -0.2
RAB40ALP0C0E4 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC13.78□□□□□ -0.2
RAB40ALP0C0E4 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC13.78□□□□□ -0.2
RAB40ALP0C0E4 RTN3P1-201ENST00000536295 711 ntBASIC13.78□□□□□ -0.2
RAB40ALP0C0E4 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC13.78□□□□□ -0.2
RAB40ALP0C0E4 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
RAB40ALP0C0E4 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
RAB40ALP0C0E4 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
RAB40ALP0C0E4 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC13.78□□□□□ -0.2
RAB40ALP0C0E4 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
RAB40ALP0C0E4 AC012044.1-201ENST00000603431 297 ntBASIC13.78□□□□□ -0.2
RAB40ALP0C0E4 AL157813.1-201ENST00000612996 587 ntBASIC13.78□□□□□ -0.2
RAB40ALP0C0E4 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC13.78□□□□□ -0.2
RAB40ALP0C0E4 KCP-203ENST00000610776 5108 ntTSL 5 BASIC13.78□□□□□ -0.2
RAB40ALP0C0E4 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RAB40ALP0C0E4 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RAB40ALP0C0E4 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RAB40ALP0C0E4 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC13.78□□□□□ -0.2
RAB40ALP0C0E4 AC009093.10-201ENST00000641956 1442 ntBASIC13.78□□□□□ -0.2
RAB40ALP0C0E4 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC13.78□□□□□ -0.2
RAB40ALP0C0E4 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RAB40ALP0C0E4 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
RAB40ALP0C0E4 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
RAB40ALP0C0E4 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
RAB40ALP0C0E4 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RAB40ALP0C0E4 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC13.78□□□□□ -0.2
RAB40ALP0C0E4 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC13.78□□□□□ -0.2
RAB40ALP0C0E4 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
RAB40ALP0C0E4 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC13.78□□□□□ -0.2
RAB40ALP0C0E4 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RAB40ALP0C0E4 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
RAB40ALP0C0E4 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
RAB40ALP0C0E4 AC005912.2-201ENST00000619492 2400 ntBASIC13.78□□□□□ -0.2
RAB40ALP0C0E4 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RAB40ALP0C0E4 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC13.78□□□□□ -0.2
RAB40ALP0C0E4 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
RAB40ALP0C0E4 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC13.77□□□□□ -0.2
RAB40ALP0C0E4 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.2
RAB40ALP0C0E4 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
RAB40ALP0C0E4 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC13.77□□□□□ -0.2
RAB40ALP0C0E4 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
RAB40ALP0C0E4 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
RAB40ALP0C0E4 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
RAB40ALP0C0E4 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
RAB40ALP0C0E4 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
RAB40ALP0C0E4 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RAB40ALP0C0E4 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RAB40ALP0C0E4 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RAB40ALP0C0E4 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RAB40ALP0C0E4 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
RAB40ALP0C0E4 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RAB40ALP0C0E4 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
RAB40ALP0C0E4 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RAB40ALP0C0E4 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
RAB40ALP0C0E4 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RAB40ALP0C0E4 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
RAB40ALP0C0E4 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
RAB40ALP0C0E4 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
RAB40ALP0C0E4 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC13.77□□□□□ -0.21
RAB40ALP0C0E4 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RAB40ALP0C0E4 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
RAB40ALP0C0E4 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RAB40ALP0C0E4 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC13.77□□□□□ -0.21
RAB40ALP0C0E4 XBP1P1-201ENST00000436573 652 ntBASIC13.77□□□□□ -0.21
RAB40ALP0C0E4 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC13.77□□□□□ -0.21
RAB40ALP0C0E4 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
RAB40ALP0C0E4 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC13.77□□□□□ -0.21
RAB40ALP0C0E4 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RAB40ALP0C0E4 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC13.77□□□□□ -0.21
RAB40ALP0C0E4 AC116345.2-201ENST00000512837 523 ntBASIC13.77□□□□□ -0.21
RAB40ALP0C0E4 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC13.77□□□□□ -0.21
RAB40ALP0C0E4 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.21
RAB40ALP0C0E4 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RAB40ALP0C0E4 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
RAB40ALP0C0E4 PRKXP1-201ENST00000561423 1122 ntBASIC13.77□□□□□ -0.21
RAB40ALP0C0E4 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC13.77□□□□□ -0.21
RAB40ALP0C0E4 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC13.77□□□□□ -0.21
RAB40ALP0C0E4 ZEB1-AS1-208ENST00000607166 2503 ntBASIC13.77□□□□□ -0.21
RAB40ALP0C0E4 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC13.77□□□□□ -0.21
RAB40ALP0C0E4 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC13.77□□□□□ -0.21
RAB40ALP0C0E4 AJ011931.1-201ENST00000618749 2492 ntBASIC13.77□□□□□ -0.21
RAB40ALP0C0E4 AC092135.3-201ENST00000624151 1846 ntBASIC13.77□□□□□ -0.21
RAB40ALP0C0E4 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RAB40ALP0C0E4 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
RAB40ALP0C0E4 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC13.77□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms