Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 AC022447.6-201ENST00000515522 438 ntBASIC18.63■□□□□ 0.57
COL5A2P05997 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC18.63■□□□□ 0.57
COL5A2P05997 AC073896.4-201ENST00000553176 403 ntTSL 2 BASIC18.63■□□□□ 0.57
COL5A2P05997 AC079414.2-201ENST00000567157 1104 ntBASIC18.63■□□□□ 0.57
COL5A2P05997 AP005899.1-201ENST00000579467 544 ntTSL 3 BASIC18.63■□□□□ 0.57
COL5A2P05997 POLR2E-204ENST00000586746 1096 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
COL5A2P05997 AC008906.2-201ENST00000606656 474 ntTSL 2 BASIC18.63■□□□□ 0.57
COL5A2P05997 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
COL5A2P05997 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COL5A2P05997 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC18.62■□□□□ 0.57
COL5A2P05997 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
COL5A2P05997 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC18.62■□□□□ 0.57
COL5A2P05997 AC011498.7-201ENST00000624986 2027 ntBASIC18.62■□□□□ 0.57
COL5A2P05997 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
COL5A2P05997 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
COL5A2P05997 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
COL5A2P05997 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
COL5A2P05997 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC18.62■□□□□ 0.57
COL5A2P05997 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
COL5A2P05997 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
COL5A2P05997 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
COL5A2P05997 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
COL5A2P05997 COLQ-202ENST00000383786 1482 ntTSL 5 BASIC18.62■□□□□ 0.57
COL5A2P05997 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
COL5A2P05997 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC18.62■□□□□ 0.57
COL5A2P05997 CYB5R2-201ENST00000299498 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
COL5A2P05997 MRPL18-201ENST00000367034 978 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
COL5A2P05997 PCLAF-202ENST00000380258 911 ntTSL 2 BASIC18.62■□□□□ 0.57
COL5A2P05997 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
COL5A2P05997 AL359853.1-202ENST00000415218 544 ntTSL 2 BASIC18.62■□□□□ 0.57
COL5A2P05997 HNRNPA1P21-201ENST00000424115 961 ntBASIC18.62■□□□□ 0.57
COL5A2P05997 PRKCZ-AS1-202ENST00000444529 622 ntTSL 3 BASIC18.62■□□□□ 0.57
COL5A2P05997 HNRNPA1P42-201ENST00000458678 957 ntBASIC18.62■□□□□ 0.57
COL5A2P05997 VEGFA-219ENST00000518824 606 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
COL5A2P05997 IKBKB-223ENST00000522147 954 ntTSL 5 BASIC18.62■□□□□ 0.57
COL5A2P05997 AC078814.4-201ENST00000546650 327 ntBASIC18.62■□□□□ 0.57
COL5A2P05997 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC18.62■□□□□ 0.57
COL5A2P05997 MCM8-AS1-201ENST00000613522 983 ntTSL 2 BASIC18.62■□□□□ 0.57
COL5A2P05997 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
COL5A2P05997 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC18.62■□□□□ 0.57
COL5A2P05997 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
COL5A2P05997 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
COL5A2P05997 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
COL5A2P05997 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
COL5A2P05997 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
COL5A2P05997 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
COL5A2P05997 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
COL5A2P05997 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
COL5A2P05997 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC18.62■□□□□ 0.57
COL5A2P05997 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
COL5A2P05997 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
COL5A2P05997 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
COL5A2P05997 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.61■□□□□ 0.57
COL5A2P05997 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
COL5A2P05997 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
COL5A2P05997 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC18.61■□□□□ 0.57
COL5A2P05997 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.61■□□□□ 0.57
COL5A2P05997 CPA5-206ENST00000474905 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
COL5A2P05997 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
COL5A2P05997 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
COL5A2P05997 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
COL5A2P05997 KRTAP6-1-201ENST00000329122 500 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
COL5A2P05997 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
COL5A2P05997 KRT8P30-201ENST00000432100 650 ntBASIC18.61■□□□□ 0.57
COL5A2P05997 AC078785.1-204ENST00000460707 764 ntTSL 3 BASIC18.61■□□□□ 0.57
COL5A2P05997 COQ10BP2-201ENST00000513804 724 ntBASIC18.61■□□□□ 0.57
COL5A2P05997 RBM4-211ENST00000530235 1011 ntTSL 3 BASIC18.61■□□□□ 0.57
COL5A2P05997 AC009055.1-201ENST00000562656 781 ntTSL 3 BASIC18.61■□□□□ 0.57
COL5A2P05997 AC087741.1-204ENST00000573935 646 ntTSL 3 BASIC18.61■□□□□ 0.57
COL5A2P05997 ZNF571-AS1-204ENST00000587121 822 ntTSL 3 BASIC18.61■□□□□ 0.57
COL5A2P05997 KLKP1-202ENST00000597246 1125 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
COL5A2P05997 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
COL5A2P05997 OR2T11-201ENST00000625105 1072 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
COL5A2P05997 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
COL5A2P05997 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
COL5A2P05997 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
COL5A2P05997 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
COL5A2P05997 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
COL5A2P05997 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
COL5A2P05997 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
COL5A2P05997 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
COL5A2P05997 NECTIN1-203ENST00000341398 1377 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
COL5A2P05997 NNMT-203ENST00000535401 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
COL5A2P05997 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC18.6■□□□□ 0.57
COL5A2P05997 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC18.6■□□□□ 0.57
COL5A2P05997 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
COL5A2P05997 U3.5-201ENST00000363448 216 ntBASIC18.6■□□□□ 0.57
COL5A2P05997 HLA-DMA-202ENST00000395303 1007 ntBASIC18.6■□□□□ 0.57
COL5A2P05997 MED19-202ENST00000431606 1203 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
COL5A2P05997 MIR2278-201ENST00000516344 96 ntBASIC18.6■□□□□ 0.57
COL5A2P05997 GABARAPL1-213ENST00000544284 531 ntTSL 3 BASIC18.6■□□□□ 0.57
COL5A2P05997 RPL18-205ENST00000549273 1036 ntTSL 2 BASIC18.6■□□□□ 0.57
COL5A2P05997 FAM192A-218ENST00000567439 1086 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
COL5A2P05997 AC009163.5-202ENST00000571737 466 ntTSL 3 BASIC18.6■□□□□ 0.57
COL5A2P05997 AC006116.2-201ENST00000589958 988 ntBASIC18.6■□□□□ 0.57
COL5A2P05997 AC023090.1-201ENST00000592906 502 ntTSL 3 BASIC18.6■□□□□ 0.57
COL5A2P05997 AC113385.2-201ENST00000614465 762 ntBASIC18.6■□□□□ 0.57
COL5A2P05997 AC020904.3-201ENST00000624199 442 ntBASIC18.6■□□□□ 0.57
COL5A2P05997 GNG14-201ENST00000640117 210 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
COL5A2P05997 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms