Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
VTNP04004 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
VTNP04004 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
VTNP04004 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
VTNP04004 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
VTNP04004 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
VTNP04004 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC15.91■□□□□ 0.14
VTNP04004 RPS9P1-201ENST00000419943 583 ntBASIC15.91■□□□□ 0.14
VTNP04004 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
VTNP04004 AC022447.6-201ENST00000515522 438 ntBASIC15.91■□□□□ 0.14
VTNP04004 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
VTNP04004 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
VTNP04004 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
VTNP04004 AC005586.2-201ENST00000563946 837 ntBASIC15.91■□□□□ 0.14
VTNP04004 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC15.91■□□□□ 0.14
VTNP04004 WDR7-208ENST00000589935 544 ntTSL 4 BASIC15.91■□□□□ 0.14
VTNP04004 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC15.91■□□□□ 0.14
VTNP04004 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC15.91■□□□□ 0.14
VTNP04004 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC15.91■□□□□ 0.14
VTNP04004 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
VTNP04004 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
VTNP04004 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
VTNP04004 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC15.91■□□□□ 0.14
VTNP04004 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC15.91■□□□□ 0.14
VTNP04004 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
VTNP04004 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
VTNP04004 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
VTNP04004 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
VTNP04004 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
VTNP04004 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
VTNP04004 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC15.91■□□□□ 0.14
VTNP04004 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
VTNP04004 AC007686.3-201ENST00000619017 3487 ntBASIC15.91■□□□□ 0.14
VTNP04004 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
VTNP04004 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
VTNP04004 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC15.91■□□□□ 0.14
VTNP04004 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
VTNP04004 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC15.9■□□□□ 0.14
VTNP04004 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC15.9■□□□□ 0.14
VTNP04004 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
VTNP04004 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
VTNP04004 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
VTNP04004 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
VTNP04004 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
VTNP04004 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC15.9■□□□□ 0.14
VTNP04004 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
VTNP04004 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
VTNP04004 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
VTNP04004 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
VTNP04004 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
VTNP04004 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
VTNP04004 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
VTNP04004 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
VTNP04004 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
VTNP04004 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
VTNP04004 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC15.9■□□□□ 0.14
VTNP04004 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
VTNP04004 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
VTNP04004 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC15.9■□□□□ 0.14
VTNP04004 NOC2LP1-201ENST00000450578 752 ntBASIC15.9■□□□□ 0.14
VTNP04004 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC15.9■□□□□ 0.14
VTNP04004 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC15.9■□□□□ 0.14
VTNP04004 CD164-210ENST00000512821 964 ntTSL 2 BASIC15.9■□□□□ 0.14
VTNP04004 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC15.9■□□□□ 0.14
VTNP04004 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC15.9■□□□□ 0.14
VTNP04004 AC103810.10-201ENST00000606504 343 ntBASIC15.9■□□□□ 0.14
VTNP04004 AC021016.3-201ENST00000608367 477 ntBASIC15.9■□□□□ 0.14
VTNP04004 AC018635.2-201ENST00000608625 364 ntBASIC15.9■□□□□ 0.14
VTNP04004 AC073352.2-201ENST00000609385 439 ntBASIC15.9■□□□□ 0.14
VTNP04004 AL591471.1-201ENST00000621855 229 ntBASIC15.9■□□□□ 0.14
VTNP04004 AL805961.1-201ENST00000642026 753 ntBASIC15.9■□□□□ 0.14
VTNP04004 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
VTNP04004 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
VTNP04004 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
VTNP04004 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
VTNP04004 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
VTNP04004 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC15.9■□□□□ 0.14
VTNP04004 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
VTNP04004 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
VTNP04004 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
VTNP04004 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC15.9■□□□□ 0.14
VTNP04004 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
VTNP04004 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC15.9■□□□□ 0.14
VTNP04004 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
VTNP04004 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
VTNP04004 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
VTNP04004 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
VTNP04004 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
VTNP04004 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
VTNP04004 FES-203ENST00000394302 2133 ntTSL 5 BASIC15.89■□□□□ 0.13
VTNP04004 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC15.89■□□□□ 0.13
VTNP04004 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
VTNP04004 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
VTNP04004 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
VTNP04004 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
VTNP04004 AC015656.1-201ENST00000624209 3578 ntBASIC15.89■□□□□ 0.13
VTNP04004 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
VTNP04004 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
VTNP04004 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
VTNP04004 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms