Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
IFNA1P01562 TUBB8P4-201ENST00000511806 1324 ntBASIC11.61□□□□□ -0.55
IFNA1P01562 BCAR1-209ENST00000546196 1340 ntBASIC11.61□□□□□ -0.55
IFNA1P01562 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC11.61□□□□□ -0.55
IFNA1P01562 MEGF8-202ENST00000334370 10966 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
IFNA1P01562 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
IFNA1P01562 AC025580.3-201ENST00000617932 1424 ntBASIC11.61□□□□□ -0.55
IFNA1P01562 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
IFNA1P01562 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
IFNA1P01562 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
IFNA1P01562 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC11.61□□□□□ -0.55
IFNA1P01562 AL157996.1-201ENST00000624684 2299 ntBASIC11.61□□□□□ -0.55
IFNA1P01562 C12orf43-202ENST00000445832 2397 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
IFNA1P01562 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
IFNA1P01562 WDR6-201ENST00000395474 4401 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
IFNA1P01562 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
IFNA1P01562 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
IFNA1P01562 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC11.61□□□□□ -0.55
IFNA1P01562 OGFR-202ENST00000370461 4506 ntAPPRIS ALT2 TSL 2 BASIC11.61□□□□□ -0.55
IFNA1P01562 PRRC2A-202ENST00000376033 6893 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
IFNA1P01562 IL21R-201ENST00000337929 4849 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
IFNA1P01562 CCDC14-220ENST00000488653 4156 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
IFNA1P01562 PJA1-203ENST00000374583 2692 ntAPPRIS P4 BASIC11.61□□□□□ -0.55
IFNA1P01562 AC011498.7-201ENST00000624986 2027 ntBASIC11.61□□□□□ -0.55
IFNA1P01562 CPPED1-202ENST00000381774 6273 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
IFNA1P01562 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC11.61□□□□□ -0.55
IFNA1P01562 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
IFNA1P01562 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC11.61□□□□□ -0.55
IFNA1P01562 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC11.61□□□□□ -0.55
IFNA1P01562 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC11.61□□□□□ -0.55
IFNA1P01562 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC11.61□□□□□ -0.55
IFNA1P01562 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
IFNA1P01562 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
IFNA1P01562 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC11.61□□□□□ -0.55
IFNA1P01562 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC11.61□□□□□ -0.55
IFNA1P01562 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC11.61□□□□□ -0.55
IFNA1P01562 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC11.61□□□□□ -0.55
IFNA1P01562 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
IFNA1P01562 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC11.61□□□□□ -0.55
IFNA1P01562 AQP6-205ENST00000618286 829 ntTSL 5 BASIC11.61□□□□□ -0.55
IFNA1P01562 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC11.61□□□□□ -0.55
IFNA1P01562 RPUSD4-201ENST00000298317 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
IFNA1P01562 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
IFNA1P01562 C19orf44-203ENST00000594035 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
IFNA1P01562 PAPLN-203ENST00000554301 4090 ntAPPRIS ALT2 TSL 2 BASIC11.61□□□□□ -0.55
IFNA1P01562 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
IFNA1P01562 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
IFNA1P01562 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
IFNA1P01562 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
IFNA1P01562 MKX-201ENST00000375790 3846 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
IFNA1P01562 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC11.61□□□□□ -0.55
IFNA1P01562 BCL9-201ENST00000234739 6278 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
IFNA1P01562 AL121827.1-201ENST00000370257 3264 ntTSL 2 BASIC11.61□□□□□ -0.55
IFNA1P01562 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC11.6□□□□□ -0.55
IFNA1P01562 REM2-202ENST00000536884 1331 ntTSL 2 BASIC11.6□□□□□ -0.55
IFNA1P01562 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC11.6□□□□□ -0.55
IFNA1P01562 EML1-203ENST00000334192 4064 ntTSL 5 BASIC11.6□□□□□ -0.55
IFNA1P01562 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
IFNA1P01562 HDAC2-205ENST00000519065 9874 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
IFNA1P01562 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
IFNA1P01562 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
IFNA1P01562 PCDHGB1-201ENST00000523390 4590 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
IFNA1P01562 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC11.6□□□□□ -0.55
IFNA1P01562 Z98257.2-202ENST00000641138 1548 ntBASIC11.6□□□□□ -0.55
IFNA1P01562 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
IFNA1P01562 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
IFNA1P01562 POC5-202ENST00000428202 2229 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
IFNA1P01562 YY1AP1-208ENST00000361831 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
IFNA1P01562 ACIN1-204ENST00000397341 2738 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
IFNA1P01562 CADM1-204ENST00000536727 3520 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
IFNA1P01562 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
IFNA1P01562 GPR179-203ENST00000616987 7980 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
IFNA1P01562 SEMA6A-202ENST00000343348 6878 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
IFNA1P01562 ADM2-202ENST00000395738 4276 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
IFNA1P01562 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC11.6□□□□□ -0.55
IFNA1P01562 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
IFNA1P01562 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
IFNA1P01562 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC11.6□□□□□ -0.55
IFNA1P01562 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
IFNA1P01562 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC11.6□□□□□ -0.55
IFNA1P01562 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
IFNA1P01562 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
IFNA1P01562 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
IFNA1P01562 TMEM229B-207ENST00000557006 3941 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
IFNA1P01562 FER1L5-204ENST00000623019 6477 ntAPPRIS ALT2 BASIC11.6□□□□□ -0.55
IFNA1P01562 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
IFNA1P01562 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
IFNA1P01562 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
IFNA1P01562 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
IFNA1P01562 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
IFNA1P01562 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
IFNA1P01562 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC11.6□□□□□ -0.55
IFNA1P01562 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC11.6□□□□□ -0.55
IFNA1P01562 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC11.6□□□□□ -0.55
IFNA1P01562 AC106730.1-201ENST00000566722 1090 ntBASIC11.6□□□□□ -0.55
IFNA1P01562 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC11.6□□□□□ -0.55
IFNA1P01562 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC11.6□□□□□ -0.55
IFNA1P01562 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
IFNA1P01562 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC11.6□□□□□ -0.55
IFNA1P01562 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC11.6□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms