Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
ATP2A1O14983 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC16.66■□□□□ 0.26
ATP2A1O14983 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC16.66■□□□□ 0.26
ATP2A1O14983 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC16.66■□□□□ 0.26
ATP2A1O14983 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ATP2A1O14983 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ATP2A1O14983 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ATP2A1O14983 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ATP2A1O14983 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ATP2A1O14983 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ATP2A1O14983 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
ATP2A1O14983 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
ATP2A1O14983 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC16.66■□□□□ 0.26
ATP2A1O14983 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
ATP2A1O14983 AL583805.1-201ENST00000391389 531 ntBASIC16.66■□□□□ 0.26
ATP2A1O14983 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC16.66■□□□□ 0.26
ATP2A1O14983 RPSAP31-201ENST00000416648 895 ntBASIC16.66■□□□□ 0.26
ATP2A1O14983 DNAJB1P1-201ENST00000429417 1024 ntBASIC16.66■□□□□ 0.26
ATP2A1O14983 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
ATP2A1O14983 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC16.66■□□□□ 0.26
ATP2A1O14983 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC16.66■□□□□ 0.26
ATP2A1O14983 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC16.66■□□□□ 0.26
ATP2A1O14983 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
ATP2A1O14983 DUX4L50-201ENST00000455245 715 ntBASIC16.66■□□□□ 0.26
ATP2A1O14983 LDHBP1-201ENST00000455730 1119 ntBASIC16.66■□□□□ 0.26
ATP2A1O14983 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC16.66■□□□□ 0.26
ATP2A1O14983 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
ATP2A1O14983 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC16.66■□□□□ 0.26
ATP2A1O14983 AP002353.1-201ENST00000528257 1599 ntBASIC16.66■□□□□ 0.26
ATP2A1O14983 FOS-204ENST00000554617 796 ntTSL 2 BASIC16.66■□□□□ 0.26
ATP2A1O14983 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC16.66■□□□□ 0.26
ATP2A1O14983 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC16.66■□□□□ 0.26
ATP2A1O14983 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC16.66■□□□□ 0.26
ATP2A1O14983 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
ATP2A1O14983 MIR7845-201ENST00000618396 99 ntBASIC16.66■□□□□ 0.26
ATP2A1O14983 AC242376.2-201ENST00000619355 883 ntBASIC16.66■□□□□ 0.26
ATP2A1O14983 MIR6727-201ENST00000620702 65 ntBASIC16.66■□□□□ 0.26
ATP2A1O14983 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
ATP2A1O14983 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ATP2A1O14983 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ATP2A1O14983 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
ATP2A1O14983 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ATP2A1O14983 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
ATP2A1O14983 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ATP2A1O14983 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ATP2A1O14983 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
ATP2A1O14983 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ATP2A1O14983 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ATP2A1O14983 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ATP2A1O14983 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ATP2A1O14983 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ATP2A1O14983 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC16.65■□□□□ 0.26
ATP2A1O14983 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
ATP2A1O14983 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
ATP2A1O14983 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC16.65■□□□□ 0.26
ATP2A1O14983 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ATP2A1O14983 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
ATP2A1O14983 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
ATP2A1O14983 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ATP2A1O14983 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC16.65■□□□□ 0.26
ATP2A1O14983 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC16.65■□□□□ 0.26
ATP2A1O14983 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC16.65■□□□□ 0.26
ATP2A1O14983 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ATP2A1O14983 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ATP2A1O14983 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ATP2A1O14983 AL591471.1-201ENST00000621855 229 ntBASIC16.65■□□□□ 0.26
ATP2A1O14983 AC090386.2-201ENST00000623010 1039 ntBASIC16.65■□□□□ 0.26
ATP2A1O14983 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
ATP2A1O14983 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC16.65■□□□□ 0.26
ATP2A1O14983 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC16.65■□□□□ 0.26
ATP2A1O14983 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ATP2A1O14983 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
ATP2A1O14983 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC16.65■□□□□ 0.26
ATP2A1O14983 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ATP2A1O14983 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ATP2A1O14983 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ATP2A1O14983 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
ATP2A1O14983 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
ATP2A1O14983 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
ATP2A1O14983 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC16.64■□□□□ 0.26
ATP2A1O14983 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
ATP2A1O14983 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC16.64■□□□□ 0.25
ATP2A1O14983 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ATP2A1O14983 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
ATP2A1O14983 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
ATP2A1O14983 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
ATP2A1O14983 LINC00528-201ENST00000600723 2160 ntBASIC16.64■□□□□ 0.25
ATP2A1O14983 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
ATP2A1O14983 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ATP2A1O14983 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ATP2A1O14983 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ATP2A1O14983 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC16.64■□□□□ 0.25
ATP2A1O14983 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
ATP2A1O14983 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ATP2A1O14983 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC16.64■□□□□ 0.25
ATP2A1O14983 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ATP2A1O14983 NAGK-204ENST00000443872 878 ntTSL 3 BASIC16.64■□□□□ 0.25
ATP2A1O14983 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
ATP2A1O14983 FTH1P22-201ENST00000456305 520 ntBASIC16.64■□□□□ 0.25
ATP2A1O14983 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms