Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
RSPO3Q9BXY4 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RSPO3Q9BXY4 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
RSPO3Q9BXY4 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RSPO3Q9BXY4 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC13.36□□□□□ -0.27
RSPO3Q9BXY4 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
RSPO3Q9BXY4 AL354989.2-201ENST00000435838 1540 ntBASIC13.36□□□□□ -0.27
RSPO3Q9BXY4 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
RSPO3Q9BXY4 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC13.36□□□□□ -0.27
RSPO3Q9BXY4 NME2P1-201ENST00000426182 414 ntBASIC13.36□□□□□ -0.27
RSPO3Q9BXY4 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC13.36□□□□□ -0.27
RSPO3Q9BXY4 AC026954.1-201ENST00000429771 1293 ntBASIC13.36□□□□□ -0.27
RSPO3Q9BXY4 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
RSPO3Q9BXY4 ST13P19-201ENST00000442505 1124 ntBASIC13.36□□□□□ -0.27
RSPO3Q9BXY4 AC100850.1-201ENST00000506768 649 ntBASIC13.36□□□□□ -0.27
RSPO3Q9BXY4 AP000812.2-201ENST00000538934 718 ntBASIC13.36□□□□□ -0.27
RSPO3Q9BXY4 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
RSPO3Q9BXY4 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
RSPO3Q9BXY4 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC13.36□□□□□ -0.27
RSPO3Q9BXY4 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC13.36□□□□□ -0.27
RSPO3Q9BXY4 AL136301.1-201ENST00000615830 422 ntBASIC13.36□□□□□ -0.27
RSPO3Q9BXY4 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
RSPO3Q9BXY4 CICP20-201ENST00000443330 2801 ntBASIC13.36□□□□□ -0.27
RSPO3Q9BXY4 STK25-235ENST00000543554 2556 ntTSL 2 BASIC13.36□□□□□ -0.27
RSPO3Q9BXY4 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
RSPO3Q9BXY4 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
RSPO3Q9BXY4 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC13.36□□□□□ -0.27
RSPO3Q9BXY4 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
RSPO3Q9BXY4 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RSPO3Q9BXY4 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC13.36□□□□□ -0.27
RSPO3Q9BXY4 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
RSPO3Q9BXY4 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RSPO3Q9BXY4 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RSPO3Q9BXY4 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC13.36□□□□□ -0.27
RSPO3Q9BXY4 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
RSPO3Q9BXY4 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
RSPO3Q9BXY4 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
RSPO3Q9BXY4 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RSPO3Q9BXY4 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
RSPO3Q9BXY4 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
RSPO3Q9BXY4 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC13.35□□□□□ -0.27
RSPO3Q9BXY4 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC13.35□□□□□ -0.27
RSPO3Q9BXY4 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RSPO3Q9BXY4 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
RSPO3Q9BXY4 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RSPO3Q9BXY4 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
RSPO3Q9BXY4 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC13.35□□□□□ -0.27
RSPO3Q9BXY4 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RSPO3Q9BXY4 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
RSPO3Q9BXY4 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
RSPO3Q9BXY4 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC13.35□□□□□ -0.27
RSPO3Q9BXY4 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RSPO3Q9BXY4 AC244394.1-201ENST00000435000 1665 ntBASIC13.35□□□□□ -0.27
RSPO3Q9BXY4 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
RSPO3Q9BXY4 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
RSPO3Q9BXY4 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
RSPO3Q9BXY4 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
RSPO3Q9BXY4 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC13.35□□□□□ -0.27
RSPO3Q9BXY4 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
RSPO3Q9BXY4 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
RSPO3Q9BXY4 MXI1-205ENST00000393134 889 ntTSL 2 BASIC13.35□□□□□ -0.27
RSPO3Q9BXY4 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RSPO3Q9BXY4 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC13.35□□□□□ -0.27
RSPO3Q9BXY4 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC13.35□□□□□ -0.27
RSPO3Q9BXY4 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
RSPO3Q9BXY4 WBP2-203ENST00000433525 928 ntTSL 2 BASIC13.35□□□□□ -0.27
RSPO3Q9BXY4 LHX6-205ENST00000464484 666 ntTSL 2 BASIC13.35□□□□□ -0.27
RSPO3Q9BXY4 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
RSPO3Q9BXY4 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
RSPO3Q9BXY4 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
RSPO3Q9BXY4 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC13.35□□□□□ -0.27
RSPO3Q9BXY4 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
RSPO3Q9BXY4 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC13.35□□□□□ -0.27
RSPO3Q9BXY4 AC132192.2-201ENST00000596206 1147 ntBASIC13.35□□□□□ -0.27
RSPO3Q9BXY4 AC009955.4-201ENST00000597192 544 ntBASIC13.35□□□□□ -0.27
RSPO3Q9BXY4 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC13.35□□□□□ -0.27
RSPO3Q9BXY4 ZACNP1-201ENST00000612259 710 ntBASIC13.35□□□□□ -0.27
RSPO3Q9BXY4 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC13.35□□□□□ -0.27
RSPO3Q9BXY4 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
RSPO3Q9BXY4 AC004241.5-201ENST00000623870 2448 ntBASIC13.35□□□□□ -0.27
RSPO3Q9BXY4 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
RSPO3Q9BXY4 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC13.35□□□□□ -0.27
RSPO3Q9BXY4 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC13.35□□□□□ -0.27
RSPO3Q9BXY4 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
RSPO3Q9BXY4 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
RSPO3Q9BXY4 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
RSPO3Q9BXY4 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RSPO3Q9BXY4 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
RSPO3Q9BXY4 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RSPO3Q9BXY4 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC13.34□□□□□ -0.27
RSPO3Q9BXY4 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RSPO3Q9BXY4 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
RSPO3Q9BXY4 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
RSPO3Q9BXY4 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
RSPO3Q9BXY4 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
RSPO3Q9BXY4 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC13.34□□□□□ -0.27
RSPO3Q9BXY4 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
RSPO3Q9BXY4 PDIA3P1-201ENST00000471856 1510 ntBASIC13.34□□□□□ -0.27
RSPO3Q9BXY4 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RSPO3Q9BXY4 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms