Protein–RNA interactions for Protein: Q9BQE3

TUBA1C, Tubulin alpha-1C chain, humanhuman

Predictions only

Length 449 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1CQ9BQE3 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
TUBA1CQ9BQE3 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TUBA1CQ9BQE3 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TUBA1CQ9BQE3 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TUBA1CQ9BQE3 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TUBA1CQ9BQE3 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TUBA1CQ9BQE3 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TUBA1CQ9BQE3 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TUBA1CQ9BQE3 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
TUBA1CQ9BQE3 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC13.9□□□□□ -0.18
TUBA1CQ9BQE3 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC13.9□□□□□ -0.18
TUBA1CQ9BQE3 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TUBA1CQ9BQE3 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TUBA1CQ9BQE3 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TUBA1CQ9BQE3 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
TUBA1CQ9BQE3 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TUBA1CQ9BQE3 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TUBA1CQ9BQE3 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TUBA1CQ9BQE3 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
TUBA1CQ9BQE3 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TUBA1CQ9BQE3 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TUBA1CQ9BQE3 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
TUBA1CQ9BQE3 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.19
TUBA1CQ9BQE3 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC13.9□□□□□ -0.19
TUBA1CQ9BQE3 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TUBA1CQ9BQE3 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TUBA1CQ9BQE3 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TUBA1CQ9BQE3 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC13.89□□□□□ -0.19
TUBA1CQ9BQE3 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TUBA1CQ9BQE3 MFF-204ENST00000353339 2186 ntTSL 5 BASIC13.89□□□□□ -0.19
TUBA1CQ9BQE3 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
TUBA1CQ9BQE3 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
TUBA1CQ9BQE3 USE1-206ENST00000595101 1776 ntTSL 2 BASIC13.89□□□□□ -0.19
TUBA1CQ9BQE3 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
TUBA1CQ9BQE3 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TUBA1CQ9BQE3 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC13.89□□□□□ -0.19
TUBA1CQ9BQE3 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC13.89□□□□□ -0.19
TUBA1CQ9BQE3 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
TUBA1CQ9BQE3 OS9-218ENST00000551035 2246 ntTSL 2 BASIC13.89□□□□□ -0.19
TUBA1CQ9BQE3 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TUBA1CQ9BQE3 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TUBA1CQ9BQE3 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
TUBA1CQ9BQE3 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC13.89□□□□□ -0.19
TUBA1CQ9BQE3 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TUBA1CQ9BQE3 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC13.89□□□□□ -0.19
TUBA1CQ9BQE3 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TUBA1CQ9BQE3 MIR658-201ENST00000385210 100 ntBASIC13.89□□□□□ -0.19
TUBA1CQ9BQE3 SUN1-204ENST00000403868 978 ntTSL 2 BASIC13.89□□□□□ -0.19
TUBA1CQ9BQE3 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC13.89□□□□□ -0.19
TUBA1CQ9BQE3 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC13.89□□□□□ -0.19
TUBA1CQ9BQE3 KRT43P-201ENST00000434019 910 ntBASIC13.89□□□□□ -0.19
TUBA1CQ9BQE3 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TUBA1CQ9BQE3 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC13.89□□□□□ -0.19
TUBA1CQ9BQE3 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TUBA1CQ9BQE3 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC13.89□□□□□ -0.19
TUBA1CQ9BQE3 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC13.89□□□□□ -0.19
TUBA1CQ9BQE3 AC068587.3-201ENST00000526613 355 ntBASIC13.89□□□□□ -0.19
TUBA1CQ9BQE3 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TUBA1CQ9BQE3 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC13.89□□□□□ -0.19
TUBA1CQ9BQE3 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC13.89□□□□□ -0.19
TUBA1CQ9BQE3 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC13.89□□□□□ -0.19
TUBA1CQ9BQE3 AP001063.1-201ENST00000568332 529 ntBASIC13.89□□□□□ -0.19
TUBA1CQ9BQE3 AC009486.1-201ENST00000569860 813 ntBASIC13.89□□□□□ -0.19
TUBA1CQ9BQE3 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC13.89□□□□□ -0.19
TUBA1CQ9BQE3 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC13.89□□□□□ -0.19
TUBA1CQ9BQE3 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TUBA1CQ9BQE3 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
TUBA1CQ9BQE3 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC13.89□□□□□ -0.19
TUBA1CQ9BQE3 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TUBA1CQ9BQE3 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC13.89□□□□□ -0.19
TUBA1CQ9BQE3 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
TUBA1CQ9BQE3 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC13.89□□□□□ -0.19
TUBA1CQ9BQE3 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TUBA1CQ9BQE3 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TUBA1CQ9BQE3 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC13.89□□□□□ -0.19
TUBA1CQ9BQE3 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TUBA1CQ9BQE3 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
TUBA1CQ9BQE3 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
TUBA1CQ9BQE3 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TUBA1CQ9BQE3 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
TUBA1CQ9BQE3 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC13.89□□□□□ -0.19
TUBA1CQ9BQE3 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TUBA1CQ9BQE3 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
TUBA1CQ9BQE3 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TUBA1CQ9BQE3 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TUBA1CQ9BQE3 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TUBA1CQ9BQE3 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TUBA1CQ9BQE3 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
TUBA1CQ9BQE3 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
TUBA1CQ9BQE3 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TUBA1CQ9BQE3 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TUBA1CQ9BQE3 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TUBA1CQ9BQE3 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TUBA1CQ9BQE3 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC13.88□□□□□ -0.19
TUBA1CQ9BQE3 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TUBA1CQ9BQE3 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TUBA1CQ9BQE3 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
TUBA1CQ9BQE3 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TUBA1CQ9BQE3 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
TUBA1CQ9BQE3 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms