Protein–RNA interactions for Protein: Q99102

MUC4, Mucin-4, humanhuman

Predictions only

Length 2,169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4Q99102 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
MUC4Q99102 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC10.74□□□□□ -0.69
MUC4Q99102 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
MUC4Q99102 AC011498.7-201ENST00000624986 2027 ntBASIC10.74□□□□□ -0.69
MUC4Q99102 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC10.74□□□□□ -0.69
MUC4Q99102 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
MUC4Q99102 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC10.74□□□□□ -0.69
MUC4Q99102 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
MUC4Q99102 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
MUC4Q99102 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
MUC4Q99102 AC099521.3-201ENST00000624251 2938 ntBASIC10.74□□□□□ -0.69
MUC4Q99102 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
MUC4Q99102 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
MUC4Q99102 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
MUC4Q99102 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
MUC4Q99102 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
MUC4Q99102 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
MUC4Q99102 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
MUC4Q99102 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
MUC4Q99102 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
MUC4Q99102 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
MUC4Q99102 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC10.74□□□□□ -0.69
MUC4Q99102 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
MUC4Q99102 AC015688.4-201ENST00000580780 1647 ntBASIC10.74□□□□□ -0.69
MUC4Q99102 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC10.74□□□□□ -0.69
MUC4Q99102 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC10.74□□□□□ -0.69
MUC4Q99102 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
MUC4Q99102 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
MUC4Q99102 MIR663B-201ENST00000408361 115 ntBASIC10.74□□□□□ -0.69
MUC4Q99102 FXNP2-201ENST00000411625 547 ntBASIC10.74□□□□□ -0.69
MUC4Q99102 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC10.74□□□□□ -0.69
MUC4Q99102 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC10.74□□□□□ -0.69
MUC4Q99102 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC10.74□□□□□ -0.69
MUC4Q99102 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
MUC4Q99102 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC10.74□□□□□ -0.69
MUC4Q99102 KIAA1614-202ENST00000367588 9654 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
MUC4Q99102 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC10.74□□□□□ -0.69
MUC4Q99102 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
MUC4Q99102 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC10.74□□□□□ -0.69
MUC4Q99102 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
MUC4Q99102 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
MUC4Q99102 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC10.74□□□□□ -0.69
MUC4Q99102 HPD-204ENST00000543163 1709 ntTSL 5 BASIC10.74□□□□□ -0.69
MUC4Q99102 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
MUC4Q99102 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
MUC4Q99102 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
MUC4Q99102 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
MUC4Q99102 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC10.74□□□□□ -0.69
MUC4Q99102 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC10.74□□□□□ -0.69
MUC4Q99102 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
MUC4Q99102 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
MUC4Q99102 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
MUC4Q99102 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
MUC4Q99102 AL590440.2-201ENST00000641973 1595 ntBASIC10.73□□□□□ -0.69
MUC4Q99102 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
MUC4Q99102 ITPR3-202ENST00000605930 9029 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
MUC4Q99102 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC10.73□□□□□ -0.69
MUC4Q99102 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC10.73□□□□□ -0.69
MUC4Q99102 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
MUC4Q99102 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
MUC4Q99102 GUK1-206ENST00000366723 845 ntTSL 5 BASIC10.73□□□□□ -0.69
MUC4Q99102 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
MUC4Q99102 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
MUC4Q99102 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC10.73□□□□□ -0.69
MUC4Q99102 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
MUC4Q99102 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
MUC4Q99102 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC10.73□□□□□ -0.69
MUC4Q99102 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
MUC4Q99102 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC10.73□□□□□ -0.69
MUC4Q99102 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC10.73□□□□□ -0.69
MUC4Q99102 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC10.73□□□□□ -0.69
MUC4Q99102 FUZ-207ENST00000526575 482 ntTSL 4 BASIC10.73□□□□□ -0.69
MUC4Q99102 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC10.73□□□□□ -0.69
MUC4Q99102 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
MUC4Q99102 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
MUC4Q99102 AP001063.1-201ENST00000568332 529 ntBASIC10.73□□□□□ -0.69
MUC4Q99102 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC10.73□□□□□ -0.69
MUC4Q99102 AC015936.2-201ENST00000593177 259 ntBASIC10.73□□□□□ -0.69
MUC4Q99102 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC10.73□□□□□ -0.69
MUC4Q99102 RPSAP52-203ENST00000622976 1023 ntBASIC10.73□□□□□ -0.69
MUC4Q99102 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
MUC4Q99102 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
MUC4Q99102 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
MUC4Q99102 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC10.73□□□□□ -0.69
MUC4Q99102 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
MUC4Q99102 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
MUC4Q99102 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
MUC4Q99102 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
MUC4Q99102 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC10.73□□□□□ -0.69
MUC4Q99102 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
MUC4Q99102 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
MUC4Q99102 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
MUC4Q99102 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
MUC4Q99102 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
MUC4Q99102 GSE1-201ENST00000253458 7495 ntAPPRIS P3 TSL 5 BASIC10.73□□□□□ -0.69
MUC4Q99102 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC10.73□□□□□ -0.69
MUC4Q99102 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC10.73□□□□□ -0.69
MUC4Q99102 DDC-213ENST00000617822 1809 ntTSL 3 BASIC10.73□□□□□ -0.69
MUC4Q99102 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
MUC4Q99102 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms