Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 AC092612.1-201ENST00000514501 998 ntBASIC15.59■□□□□ 0.09
TRIM43Q96BQ3 AC087620.1-201ENST00000520037 447 ntTSL 3 BASIC15.59■□□□□ 0.09
TRIM43Q96BQ3 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRIM43Q96BQ3 EHF-208ENST00000530286 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRIM43Q96BQ3 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRIM43Q96BQ3 F11R-204ENST00000537746 1245 ntTSL 2 BASIC15.59■□□□□ 0.09
TRIM43Q96BQ3 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
TRIM43Q96BQ3 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC15.59■□□□□ 0.09
TRIM43Q96BQ3 LINC02252-201ENST00000565706 487 ntTSL 3 BASIC15.59■□□□□ 0.09
TRIM43Q96BQ3 POLR2E-204ENST00000586746 1096 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
TRIM43Q96BQ3 AC093503.1-201ENST00000593888 495 ntTSL 3 BASIC15.59■□□□□ 0.09
TRIM43Q96BQ3 Metazoa_SRP.75-201ENST00000614439 293 ntBASIC15.59■□□□□ 0.09
TRIM43Q96BQ3 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.59■□□□□ 0.09
TRIM43Q96BQ3 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC15.59■□□□□ 0.09
TRIM43Q96BQ3 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRIM43Q96BQ3 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRIM43Q96BQ3 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRIM43Q96BQ3 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRIM43Q96BQ3 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRIM43Q96BQ3 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRIM43Q96BQ3 SHANK2-202ENST00000357171 1373 ntTSL 5 BASIC15.59■□□□□ 0.09
TRIM43Q96BQ3 FKBP4P8-201ENST00000610931 1369 ntBASIC15.59■□□□□ 0.09
TRIM43Q96BQ3 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRIM43Q96BQ3 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC15.59■□□□□ 0.09
TRIM43Q96BQ3 AL365181.1-201ENST00000564032 1828 ntBASIC15.59■□□□□ 0.09
TRIM43Q96BQ3 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC15.59■□□□□ 0.09
TRIM43Q96BQ3 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC15.59■□□□□ 0.09
TRIM43Q96BQ3 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC15.59■□□□□ 0.09
TRIM43Q96BQ3 CR382285.1-201ENST00000625012 1485 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRIM43Q96BQ3 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
TRIM43Q96BQ3 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
TRIM43Q96BQ3 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
TRIM43Q96BQ3 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
TRIM43Q96BQ3 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
TRIM43Q96BQ3 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.09
TRIM43Q96BQ3 PPHLN1-223ENST00000610488 1521 ntTSL 5 BASIC15.58■□□□□ 0.09
TRIM43Q96BQ3 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC15.58■□□□□ 0.09
TRIM43Q96BQ3 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
TRIM43Q96BQ3 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
TRIM43Q96BQ3 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRIM43Q96BQ3 AADAT-206ENST00000509167 2113 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRIM43Q96BQ3 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRIM43Q96BQ3 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
TRIM43Q96BQ3 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRIM43Q96BQ3 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRIM43Q96BQ3 LCN6-201ENST00000341206 717 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRIM43Q96BQ3 RPRD2-201ENST00000369067 1043 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
TRIM43Q96BQ3 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRIM43Q96BQ3 WASIR1-201ENST00000399966 1054 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRIM43Q96BQ3 LINC00483-202ENST00000419688 558 ntTSL 3 BASIC15.58■□□□□ 0.08
TRIM43Q96BQ3 LRRC3-AS1-201ENST00000426578 784 ntTSL 3 BASIC15.58■□□□□ 0.08
TRIM43Q96BQ3 BX248123.1-201ENST00000429070 606 ntTSL 3 BASIC15.58■□□□□ 0.08
TRIM43Q96BQ3 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
TRIM43Q96BQ3 RN7SKP155-201ENST00000516031 288 ntBASIC15.58■□□□□ 0.08
TRIM43Q96BQ3 AC104964.1-201ENST00000520494 489 ntTSL 2 BASIC15.58■□□□□ 0.08
TRIM43Q96BQ3 UBR5-AS1-202ENST00000520820 800 ntTSL 2 BASIC15.58■□□□□ 0.08
TRIM43Q96BQ3 LZTS1-AS1-201ENST00000523103 892 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRIM43Q96BQ3 AC012617.1-201ENST00000586345 797 ntTSL 2 BASIC15.58■□□□□ 0.08
TRIM43Q96BQ3 AL135936.1-201ENST00000617956 998 ntTSL 5 BASIC15.58■□□□□ 0.08
TRIM43Q96BQ3 ANKRD36C-208ENST00000619511 737 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRIM43Q96BQ3 RARS-210ENST00000626454 177 ntTSL 5 BASIC15.58■□□□□ 0.08
TRIM43Q96BQ3 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC15.58■□□□□ 0.08
TRIM43Q96BQ3 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRIM43Q96BQ3 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC15.58■□□□□ 0.08
TRIM43Q96BQ3 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRIM43Q96BQ3 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRIM43Q96BQ3 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
TRIM43Q96BQ3 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRIM43Q96BQ3 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRIM43Q96BQ3 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC15.58■□□□□ 0.08
TRIM43Q96BQ3 MKRN2-202ENST00000411987 1436 ntTSL 2 BASIC15.58■□□□□ 0.08
TRIM43Q96BQ3 KRT8P18-201ENST00000413425 1445 ntBASIC15.58■□□□□ 0.08
TRIM43Q96BQ3 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
TRIM43Q96BQ3 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC15.58■□□□□ 0.08
TRIM43Q96BQ3 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRIM43Q96BQ3 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC15.58■□□□□ 0.08
TRIM43Q96BQ3 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRIM43Q96BQ3 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRIM43Q96BQ3 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRIM43Q96BQ3 COQ4-201ENST00000300452 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRIM43Q96BQ3 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC15.58■□□□□ 0.08
TRIM43Q96BQ3 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRIM43Q96BQ3 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM43Q96BQ3 BANP-204ENST00000393208 2283 ntTSL 2 BASIC15.57■□□□□ 0.08
TRIM43Q96BQ3 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM43Q96BQ3 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM43Q96BQ3 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM43Q96BQ3 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM43Q96BQ3 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM43Q96BQ3 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM43Q96BQ3 PCDHA1-201ENST00000378133 2726 ntBASIC15.57■□□□□ 0.08
TRIM43Q96BQ3 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC15.57■□□□□ 0.08
TRIM43Q96BQ3 STK24-203ENST00000397517 4578 ntTSL 2 BASIC15.57■□□□□ 0.08
TRIM43Q96BQ3 PGAM2-201ENST00000297283 857 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM43Q96BQ3 COX8A-201ENST00000314133 507 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM43Q96BQ3 HIST1H4B-201ENST00000377745 438 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
TRIM43Q96BQ3 TEX33-201ENST00000381821 978 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM43Q96BQ3 OR10N1P-201ENST00000392758 869 ntBASIC15.57■□□□□ 0.08
TRIM43Q96BQ3 BX679664.3-201ENST00000414070 555 ntBASIC15.57■□□□□ 0.08
TRIM43Q96BQ3 PGAM1P11-201ENST00000416729 680 ntBASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 158.6 ms