Protein–RNA interactions for Protein: Q8NDW4

ZNF248, Zinc finger protein 248, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF248Q8NDW4 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
ZNF248Q8NDW4 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
ZNF248Q8NDW4 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC14.02□□□□□ -0.16
ZNF248Q8NDW4 STRN-202ENST00000379213 2254 ntTSL 5 BASIC14.02□□□□□ -0.16
ZNF248Q8NDW4 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
ZNF248Q8NDW4 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
ZNF248Q8NDW4 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
ZNF248Q8NDW4 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
ZNF248Q8NDW4 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
ZNF248Q8NDW4 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
ZNF248Q8NDW4 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
ZNF248Q8NDW4 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
ZNF248Q8NDW4 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC14.02□□□□□ -0.16
ZNF248Q8NDW4 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
ZNF248Q8NDW4 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
ZNF248Q8NDW4 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
ZNF248Q8NDW4 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
ZNF248Q8NDW4 OR2K2-202ENST00000374428 1038 ntBASIC14.02□□□□□ -0.17
ZNF248Q8NDW4 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ZNF248Q8NDW4 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
ZNF248Q8NDW4 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ZNF248Q8NDW4 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
ZNF248Q8NDW4 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
ZNF248Q8NDW4 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC14.02□□□□□ -0.17
ZNF248Q8NDW4 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC14.02□□□□□ -0.17
ZNF248Q8NDW4 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
ZNF248Q8NDW4 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
ZNF248Q8NDW4 FOS-204ENST00000554617 796 ntTSL 2 BASIC14.02□□□□□ -0.17
ZNF248Q8NDW4 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC14.02□□□□□ -0.17
ZNF248Q8NDW4 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
ZNF248Q8NDW4 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC14.02□□□□□ -0.17
ZNF248Q8NDW4 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC14.02□□□□□ -0.17
ZNF248Q8NDW4 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC14.02□□□□□ -0.17
ZNF248Q8NDW4 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC14.02□□□□□ -0.17
ZNF248Q8NDW4 AC005632.3-201ENST00000605544 308 ntBASIC14.02□□□□□ -0.17
ZNF248Q8NDW4 AC138696.2-201ENST00000607376 223 ntBASIC14.02□□□□□ -0.17
ZNF248Q8NDW4 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC14.02□□□□□ -0.17
ZNF248Q8NDW4 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
ZNF248Q8NDW4 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ZNF248Q8NDW4 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ZNF248Q8NDW4 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC14.02□□□□□ -0.17
ZNF248Q8NDW4 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ZNF248Q8NDW4 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
ZNF248Q8NDW4 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
ZNF248Q8NDW4 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC14.02□□□□□ -0.17
ZNF248Q8NDW4 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ZNF248Q8NDW4 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ZNF248Q8NDW4 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
ZNF248Q8NDW4 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
ZNF248Q8NDW4 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
ZNF248Q8NDW4 REXO1L5P-201ENST00000622260 2098 ntBASIC14.02□□□□□ -0.17
ZNF248Q8NDW4 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC14.02□□□□□ -0.17
ZNF248Q8NDW4 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ZNF248Q8NDW4 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
ZNF248Q8NDW4 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC14.01□□□□□ -0.17
ZNF248Q8NDW4 AC244394.1-201ENST00000435000 1665 ntBASIC14.01□□□□□ -0.17
ZNF248Q8NDW4 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ZNF248Q8NDW4 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
ZNF248Q8NDW4 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
ZNF248Q8NDW4 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
ZNF248Q8NDW4 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ZNF248Q8NDW4 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ZNF248Q8NDW4 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC14.01□□□□□ -0.17
ZNF248Q8NDW4 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
ZNF248Q8NDW4 FRMPD2B-201ENST00000431305 1347 ntBASIC14.01□□□□□ -0.17
ZNF248Q8NDW4 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ZNF248Q8NDW4 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
ZNF248Q8NDW4 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ZNF248Q8NDW4 AL512430.1-201ENST00000392575 860 ntBASIC14.01□□□□□ -0.17
ZNF248Q8NDW4 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ZNF248Q8NDW4 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC14.01□□□□□ -0.17
ZNF248Q8NDW4 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ZNF248Q8NDW4 NAGK-204ENST00000443872 878 ntTSL 3 BASIC14.01□□□□□ -0.17
ZNF248Q8NDW4 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC14.01□□□□□ -0.17
ZNF248Q8NDW4 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC14.01□□□□□ -0.17
ZNF248Q8NDW4 SCARNA21-201ENST00000517026 139 ntBASIC14.01□□□□□ -0.17
ZNF248Q8NDW4 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC14.01□□□□□ -0.17
ZNF248Q8NDW4 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC14.01□□□□□ -0.17
ZNF248Q8NDW4 AL109837.1-201ENST00000603272 613 ntBASIC14.01□□□□□ -0.17
ZNF248Q8NDW4 AC007881.3-201ENST00000608897 607 ntBASIC14.01□□□□□ -0.17
ZNF248Q8NDW4 AC087392.5-201ENST00000612517 489 ntBASIC14.01□□□□□ -0.17
ZNF248Q8NDW4 MIR6769A-201ENST00000617340 73 ntBASIC14.01□□□□□ -0.17
ZNF248Q8NDW4 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC14.01□□□□□ -0.17
ZNF248Q8NDW4 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC14.01□□□□□ -0.17
ZNF248Q8NDW4 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
ZNF248Q8NDW4 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC14.01□□□□□ -0.17
ZNF248Q8NDW4 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ZNF248Q8NDW4 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
ZNF248Q8NDW4 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
ZNF248Q8NDW4 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ZNF248Q8NDW4 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ZNF248Q8NDW4 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ZNF248Q8NDW4 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ZNF248Q8NDW4 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ZNF248Q8NDW4 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ZNF248Q8NDW4 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC14.01□□□□□ -0.17
ZNF248Q8NDW4 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC14.01□□□□□ -0.17
ZNF248Q8NDW4 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC14.01□□□□□ -0.17
ZNF248Q8NDW4 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
ZNF248Q8NDW4 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms