Protein–RNA interactions for Protein: Q8IY92

SLX4, Structure-specific endonuclease subunit SLX4, humanhuman

Predictions only

Length 1,834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4Q8IY92 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SLX4Q8IY92 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLX4Q8IY92 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLX4Q8IY92 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
SLX4Q8IY92 CAMP-201ENST00000296435 745 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLX4Q8IY92 EPPIN-201ENST00000336443 1217 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SLX4Q8IY92 SOX2-OT-209ENST00000485035 561 ntTSL 4 BASIC17.26■□□□□ 0.35
SLX4Q8IY92 AC113347.2-201ENST00000512350 279 ntBASIC17.26■□□□□ 0.35
SLX4Q8IY92 VEGFA-219ENST00000518824 606 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SLX4Q8IY92 AC074050.2-201ENST00000563338 538 ntTSL 3 BASIC17.26■□□□□ 0.35
SLX4Q8IY92 AC009163.5-202ENST00000571737 466 ntTSL 3 BASIC17.26■□□□□ 0.35
SLX4Q8IY92 AP005899.1-201ENST00000579467 544 ntTSL 3 BASIC17.26■□□□□ 0.35
SLX4Q8IY92 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC17.26■□□□□ 0.35
SLX4Q8IY92 SOX2-OT-222ENST00000595084 853 ntTSL 5 BASIC17.26■□□□□ 0.35
SLX4Q8IY92 SOX2-OT-232ENST00000600386 792 ntTSL 5 BASIC17.26■□□□□ 0.35
SLX4Q8IY92 PRMT1P1-201ENST00000604252 1009 ntBASIC17.26■□□□□ 0.35
SLX4Q8IY92 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLX4Q8IY92 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.26■□□□□ 0.35
SLX4Q8IY92 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLX4Q8IY92 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLX4Q8IY92 USP39-220ENST00000613444 2161 ntTSL 2 BASIC17.26■□□□□ 0.35
SLX4Q8IY92 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLX4Q8IY92 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLX4Q8IY92 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC17.26■□□□□ 0.35
SLX4Q8IY92 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC17.26■□□□□ 0.35
SLX4Q8IY92 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SLX4Q8IY92 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SLX4Q8IY92 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLX4Q8IY92 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLX4Q8IY92 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SLX4Q8IY92 PRL-201ENST00000306482 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLX4Q8IY92 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
SLX4Q8IY92 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.26■□□□□ 0.35
SLX4Q8IY92 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLX4Q8IY92 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SLX4Q8IY92 BCL2L12P1-201ENST00000508390 733 ntBASIC17.26■□□□□ 0.35
SLX4Q8IY92 FAAP24-203ENST00000589646 836 ntTSL 3 BASIC17.26■□□□□ 0.35
SLX4Q8IY92 RNF103-CHMP3-202ENST00000604011 1135 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
SLX4Q8IY92 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLX4Q8IY92 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLX4Q8IY92 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC17.25■□□□□ 0.35
SLX4Q8IY92 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SLX4Q8IY92 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC17.25■□□□□ 0.35
SLX4Q8IY92 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC17.25■□□□□ 0.35
SLX4Q8IY92 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SLX4Q8IY92 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SLX4Q8IY92 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SLX4Q8IY92 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
SLX4Q8IY92 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC17.25■□□□□ 0.35
SLX4Q8IY92 CFAP36-204ENST00000406691 1575 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SLX4Q8IY92 OLFML2B-202ENST00000367938 1153 ntTSL 2 BASIC17.25■□□□□ 0.35
SLX4Q8IY92 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC17.25■□□□□ 0.35
SLX4Q8IY92 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SLX4Q8IY92 AL359853.1-202ENST00000415218 544 ntTSL 2 BASIC17.25■□□□□ 0.35
SLX4Q8IY92 DDX39B-AS1-208ENST00000420520 516 ntTSL 3 BASIC17.25■□□□□ 0.35
SLX4Q8IY92 CLDN25-201ENST00000453129 754 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
SLX4Q8IY92 AL512310.5-201ENST00000551999 515 ntBASIC17.25■□□□□ 0.35
SLX4Q8IY92 SRP54-AS1-204ENST00000556705 580 ntTSL 2 BASIC17.25■□□□□ 0.35
SLX4Q8IY92 IFI27L1-212ENST00000557218 413 ntTSL 3 BASIC17.25■□□□□ 0.35
SLX4Q8IY92 ARL17B-203ENST00000570618 1140 ntTSL 2 BASIC17.25■□□□□ 0.35
SLX4Q8IY92 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC17.25■□□□□ 0.35
SLX4Q8IY92 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
SLX4Q8IY92 GNG14-201ENST00000640117 210 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
SLX4Q8IY92 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SLX4Q8IY92 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SLX4Q8IY92 COLQ-202ENST00000383786 1482 ntTSL 5 BASIC17.25■□□□□ 0.35
SLX4Q8IY92 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
SLX4Q8IY92 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
SLX4Q8IY92 CICP6-201ENST00000457191 2729 ntBASIC17.25■□□□□ 0.35
SLX4Q8IY92 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SLX4Q8IY92 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SLX4Q8IY92 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SLX4Q8IY92 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SLX4Q8IY92 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
SLX4Q8IY92 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SLX4Q8IY92 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC17.24■□□□□ 0.35
SLX4Q8IY92 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLX4Q8IY92 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLX4Q8IY92 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLX4Q8IY92 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLX4Q8IY92 AC103592.1-201ENST00000394513 664 ntBASIC17.24■□□□□ 0.35
SLX4Q8IY92 AC114812.1-201ENST00000421868 689 ntTSL 2 BASIC17.24■□□□□ 0.35
SLX4Q8IY92 AL121987.1-201ENST00000435580 645 ntTSL 3 BASIC17.24■□□□□ 0.35
SLX4Q8IY92 AC025594.1-201ENST00000469533 543 ntBASIC17.24■□□□□ 0.35
SLX4Q8IY92 AC099548.2-201ENST00000491047 571 ntTSL 4 BASIC17.24■□□□□ 0.35
SLX4Q8IY92 AC078814.4-201ENST00000546650 327 ntBASIC17.24■□□□□ 0.35
SLX4Q8IY92 BLOC1S1-202ENST00000548556 525 ntTSL 2 BASIC17.24■□□□□ 0.35
SLX4Q8IY92 SRP14-208ENST00000560773 468 ntTSL 3 BASIC17.24■□□□□ 0.35
SLX4Q8IY92 SLC9A3R2-204ENST00000563587 1037 ntTSL 2 BASIC17.24■□□□□ 0.35
SLX4Q8IY92 AC132825.4-202ENST00000578792 434 ntBASIC17.24■□□□□ 0.35
SLX4Q8IY92 AC011489.1-201ENST00000586744 690 ntTSL 3 BASIC17.24■□□□□ 0.35
SLX4Q8IY92 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLX4Q8IY92 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC17.24■□□□□ 0.35
SLX4Q8IY92 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
SLX4Q8IY92 TMEM9B-202ENST00000525069 1433 ntTSL 2 BASIC17.24■□□□□ 0.35
SLX4Q8IY92 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLX4Q8IY92 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.24■□□□□ 0.35
SLX4Q8IY92 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
SLX4Q8IY92 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
SLX4Q8IY92 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms