Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 AL136309.1-201ENST00000403917 691 ntBASIC15.06■□□□□ 0
CDKL3Q8IVW4 AL035414.1-201ENST00000451327 857 ntBASIC15.06■□□□□ 0
CDKL3Q8IVW4 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC15.06■□□□□ 0
CDKL3Q8IVW4 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC15.06■□□□□ 0
CDKL3Q8IVW4 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC15.06■□□□□ 0
CDKL3Q8IVW4 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
CDKL3Q8IVW4 APRT-204ENST00000563655 709 ntTSL 5 BASIC15.06■□□□□ 0
CDKL3Q8IVW4 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC15.06■□□□□ 0
CDKL3Q8IVW4 AC132938.2-201ENST00000579188 680 ntBASIC15.06■□□□□ 0
CDKL3Q8IVW4 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC15.06■□□□□ 0
CDKL3Q8IVW4 AL591163.1-201ENST00000641757 987 ntBASIC15.06■□□□□ 0
CDKL3Q8IVW4 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC15.06■□□□□ 0
CDKL3Q8IVW4 AC064801.2-201ENST00000625052 1303 ntBASIC15.06■□□□□ 0
CDKL3Q8IVW4 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC15.06■□□□□ 0
CDKL3Q8IVW4 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CDKL3Q8IVW4 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CDKL3Q8IVW4 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC15.06■□□□□ 0
CDKL3Q8IVW4 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CDKL3Q8IVW4 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CDKL3Q8IVW4 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC15.06■□□□□ 0
CDKL3Q8IVW4 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
CDKL3Q8IVW4 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
CDKL3Q8IVW4 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC15.06■□□□□ 0
CDKL3Q8IVW4 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
CDKL3Q8IVW4 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC15.06■□□□□ 0
CDKL3Q8IVW4 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CDKL3Q8IVW4 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC15.05■□□□□ 0
CDKL3Q8IVW4 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
CDKL3Q8IVW4 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
CDKL3Q8IVW4 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC15.05■□□□□ 0
CDKL3Q8IVW4 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
CDKL3Q8IVW4 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
CDKL3Q8IVW4 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
CDKL3Q8IVW4 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
CDKL3Q8IVW4 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ 0
CDKL3Q8IVW4 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
CDKL3Q8IVW4 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
CDKL3Q8IVW4 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC15.05■□□□□ 0
CDKL3Q8IVW4 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CDKL3Q8IVW4 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC15.05■□□□□ -0
CDKL3Q8IVW4 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC15.05■□□□□ -0
CDKL3Q8IVW4 CNN2P8-201ENST00000421872 913 ntBASIC15.05■□□□□ -0
CDKL3Q8IVW4 KRT43P-201ENST00000434019 910 ntBASIC15.05■□□□□ -0
CDKL3Q8IVW4 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ -0
CDKL3Q8IVW4 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC15.05■□□□□ -0
CDKL3Q8IVW4 AC007551.1-201ENST00000457394 519 ntBASIC15.05■□□□□ -0
CDKL3Q8IVW4 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC15.05■□□□□ -0
CDKL3Q8IVW4 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC15.05■□□□□ -0
CDKL3Q8IVW4 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC15.05■□□□□ -0
CDKL3Q8IVW4 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC15.05■□□□□ -0
CDKL3Q8IVW4 AC008825.2-201ENST00000603374 718 ntBASIC15.05■□□□□ -0
CDKL3Q8IVW4 AC073413.1-201ENST00000603927 732 ntBASIC15.05■□□□□ -0
CDKL3Q8IVW4 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC15.05■□□□□ -0
CDKL3Q8IVW4 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CDKL3Q8IVW4 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
CDKL3Q8IVW4 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
CDKL3Q8IVW4 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CDKL3Q8IVW4 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
CDKL3Q8IVW4 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC15.05■□□□□ -0
CDKL3Q8IVW4 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
CDKL3Q8IVW4 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC15.05■□□□□ -0
CDKL3Q8IVW4 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
CDKL3Q8IVW4 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
CDKL3Q8IVW4 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
CDKL3Q8IVW4 CICP16-201ENST00000502609 2813 ntBASIC15.05■□□□□ -0
CDKL3Q8IVW4 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
CDKL3Q8IVW4 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
CDKL3Q8IVW4 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC15.05■□□□□ -0
CDKL3Q8IVW4 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC15.05■□□□□ -0
CDKL3Q8IVW4 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CDKL3Q8IVW4 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CDKL3Q8IVW4 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CDKL3Q8IVW4 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC15.04■□□□□ -0
CDKL3Q8IVW4 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
CDKL3Q8IVW4 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
CDKL3Q8IVW4 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC15.04■□□□□ -0
CDKL3Q8IVW4 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
CDKL3Q8IVW4 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CDKL3Q8IVW4 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
CDKL3Q8IVW4 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC15.04■□□□□ -0
CDKL3Q8IVW4 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
CDKL3Q8IVW4 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC15.04■□□□□ -0
CDKL3Q8IVW4 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
CDKL3Q8IVW4 HARS-202ENST00000415192 1401 ntTSL 2 BASIC15.04■□□□□ -0
CDKL3Q8IVW4 TUBB8P4-201ENST00000511806 1324 ntBASIC15.04■□□□□ -0
CDKL3Q8IVW4 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC15.04■□□□□ -0
CDKL3Q8IVW4 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC15.04■□□□□ -0
CDKL3Q8IVW4 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CDKL3Q8IVW4 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CDKL3Q8IVW4 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC15.04■□□□□ -0
CDKL3Q8IVW4 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC15.04■□□□□ -0
CDKL3Q8IVW4 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC15.04■□□□□ -0
CDKL3Q8IVW4 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC15.04■□□□□ -0
CDKL3Q8IVW4 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC15.04■□□□□ -0
CDKL3Q8IVW4 AP005018.1-201ENST00000525475 301 ntBASIC15.04■□□□□ -0
CDKL3Q8IVW4 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC15.04■□□□□ -0
CDKL3Q8IVW4 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC15.04■□□□□ -0
CDKL3Q8IVW4 AC005586.2-201ENST00000563946 837 ntBASIC15.04■□□□□ -0
CDKL3Q8IVW4 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC15.04■□□□□ -0
CDKL3Q8IVW4 SRP9-204ENST00000619790 377 ntTSL 2 BASIC15.04■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms