Protein–RNA interactions for Protein: Q2M329

CCDC96, Coiled-coil domain-containing protein 96, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC96Q2M329 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CCDC96Q2M329 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC96Q2M329 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
CCDC96Q2M329 AL606495.2-201ENST00000605867 535 ntBASIC17.05■□□□□ 0.32
CCDC96Q2M329 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC17.05■□□□□ 0.32
CCDC96Q2M329 AP001505.2-201ENST00000616815 443 ntBASIC17.05■□□□□ 0.32
CCDC96Q2M329 AC100757.4-201ENST00000626934 759 ntBASIC17.05■□□□□ 0.32
CCDC96Q2M329 AC068587.10-201ENST00000641210 219 ntBASIC17.05■□□□□ 0.32
CCDC96Q2M329 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC96Q2M329 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC96Q2M329 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC96Q2M329 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC96Q2M329 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC96Q2M329 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC96Q2M329 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC96Q2M329 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC17.05■□□□□ 0.32
CCDC96Q2M329 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC96Q2M329 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC17.05■□□□□ 0.32
CCDC96Q2M329 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC17.05■□□□□ 0.32
CCDC96Q2M329 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC96Q2M329 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC17.05■□□□□ 0.32
CCDC96Q2M329 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC17.05■□□□□ 0.32
CCDC96Q2M329 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC96Q2M329 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC96Q2M329 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC17.05■□□□□ 0.32
CCDC96Q2M329 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CCDC96Q2M329 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
CCDC96Q2M329 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC96Q2M329 AC009093.10-201ENST00000641956 1442 ntBASIC17.04■□□□□ 0.32
CCDC96Q2M329 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CCDC96Q2M329 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC96Q2M329 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CCDC96Q2M329 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC96Q2M329 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC96Q2M329 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC17.04■□□□□ 0.32
CCDC96Q2M329 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC96Q2M329 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC17.04■□□□□ 0.32
CCDC96Q2M329 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC17.04■□□□□ 0.32
CCDC96Q2M329 AC007686.3-201ENST00000619017 3487 ntBASIC17.04■□□□□ 0.32
CCDC96Q2M329 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC17.04■□□□□ 0.32
CCDC96Q2M329 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC17.04■□□□□ 0.32
CCDC96Q2M329 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CCDC96Q2M329 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC96Q2M329 PID1-202ENST00000392054 2745 ntTSL 2 BASIC17.04■□□□□ 0.32
CCDC96Q2M329 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC96Q2M329 CYP4F23P-201ENST00000593402 1579 ntBASIC17.04■□□□□ 0.32
CCDC96Q2M329 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC96Q2M329 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC17.04■□□□□ 0.32
CCDC96Q2M329 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC96Q2M329 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
CCDC96Q2M329 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC17.04■□□□□ 0.32
CCDC96Q2M329 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
CCDC96Q2M329 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC17.04■□□□□ 0.32
CCDC96Q2M329 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC17.04■□□□□ 0.32
CCDC96Q2M329 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC17.04■□□□□ 0.32
CCDC96Q2M329 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC17.04■□□□□ 0.32
CCDC96Q2M329 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC17.04■□□□□ 0.32
CCDC96Q2M329 FADS2-212ENST00000522639 360 ntTSL 5 BASIC17.04■□□□□ 0.32
CCDC96Q2M329 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC17.04■□□□□ 0.32
CCDC96Q2M329 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC17.04■□□□□ 0.32
CCDC96Q2M329 FADS2-215ENST00000574708 385 ntTSL 3 BASIC17.04■□□□□ 0.32
CCDC96Q2M329 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC17.04■□□□□ 0.32
CCDC96Q2M329 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC96Q2M329 AC133540.1-201ENST00000620845 1019 ntBASIC17.04■□□□□ 0.32
CCDC96Q2M329 PPA1-206ENST00000625364 644 ntTSL 5 BASIC17.04■□□□□ 0.32
CCDC96Q2M329 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
CCDC96Q2M329 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC96Q2M329 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC96Q2M329 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC96Q2M329 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC17.04■□□□□ 0.32
CCDC96Q2M329 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
CCDC96Q2M329 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CCDC96Q2M329 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC17.04■□□□□ 0.32
CCDC96Q2M329 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC96Q2M329 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC96Q2M329 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC96Q2M329 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC17.04■□□□□ 0.32
CCDC96Q2M329 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC96Q2M329 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
CCDC96Q2M329 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC96Q2M329 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC96Q2M329 AL157791.1-201ENST00000553667 1699 ntBASIC17.04■□□□□ 0.32
CCDC96Q2M329 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC17.04■□□□□ 0.32
CCDC96Q2M329 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC96Q2M329 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC96Q2M329 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC96Q2M329 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC96Q2M329 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC96Q2M329 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC96Q2M329 AC008132.1-202ENST00000342005 1389 ntBASIC17.03■□□□□ 0.32
CCDC96Q2M329 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC17.03■□□□□ 0.32
CCDC96Q2M329 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC17.03■□□□□ 0.32
CCDC96Q2M329 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC96Q2M329 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CCDC96Q2M329 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC96Q2M329 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC96Q2M329 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC96Q2M329 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC96Q2M329 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC96Q2M329 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms