Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 AC008687.7-202ENST00000637404 953 ntBASIC13.84□□□□□ -0.19
RAE1P78406 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC13.84□□□□□ -0.19
RAE1P78406 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC13.84□□□□□ -0.19
RAE1P78406 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC13.84□□□□□ -0.19
RAE1P78406 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RAE1P78406 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
RAE1P78406 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC13.84□□□□□ -0.19
RAE1P78406 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RAE1P78406 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
RAE1P78406 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
RAE1P78406 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
RAE1P78406 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
RAE1P78406 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC13.84□□□□□ -0.19
RAE1P78406 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
RAE1P78406 AL008718.2-201ENST00000609206 1313 ntBASIC13.84□□□□□ -0.19
RAE1P78406 AC111170.3-201ENST00000624282 2464 ntBASIC13.84□□□□□ -0.19
RAE1P78406 AL023775.1-201ENST00000454907 1746 ntBASIC13.84□□□□□ -0.19
RAE1P78406 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC13.84□□□□□ -0.19
RAE1P78406 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC13.84□□□□□ -0.19
RAE1P78406 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
RAE1P78406 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RAE1P78406 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RAE1P78406 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RAE1P78406 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC13.84□□□□□ -0.19
RAE1P78406 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RAE1P78406 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC13.84□□□□□ -0.19
RAE1P78406 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
RAE1P78406 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
RAE1P78406 MAPT-IT1-201ENST00000624111 3016 ntBASIC13.83□□□□□ -0.19
RAE1P78406 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
RAE1P78406 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC13.83□□□□□ -0.2
RAE1P78406 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
RAE1P78406 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
RAE1P78406 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
RAE1P78406 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
RAE1P78406 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC13.83□□□□□ -0.2
RAE1P78406 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RAE1P78406 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC13.83□□□□□ -0.2
RAE1P78406 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
RAE1P78406 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
RAE1P78406 AC244394.1-201ENST00000435000 1665 ntBASIC13.83□□□□□ -0.2
RAE1P78406 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
RAE1P78406 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
RAE1P78406 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
RAE1P78406 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC13.83□□□□□ -0.2
RAE1P78406 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
RAE1P78406 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC13.83□□□□□ -0.2
RAE1P78406 U91328.1-201ENST00000437528 223 ntBASIC13.83□□□□□ -0.2
RAE1P78406 KLF2P1-201ENST00000447438 1042 ntBASIC13.83□□□□□ -0.2
RAE1P78406 GAPDHP21-201ENST00000450301 1010 ntBASIC13.83□□□□□ -0.2
RAE1P78406 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC13.83□□□□□ -0.2
RAE1P78406 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC13.83□□□□□ -0.2
RAE1P78406 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
RAE1P78406 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RAE1P78406 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC13.83□□□□□ -0.2
RAE1P78406 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC13.83□□□□□ -0.2
RAE1P78406 RPS24-214ENST00000613865 538 ntTSL 5 BASIC13.83□□□□□ -0.2
RAE1P78406 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
RAE1P78406 PFAS-212ENST00000625942 396 ntTSL 5 BASIC13.83□□□□□ -0.2
RAE1P78406 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC13.83□□□□□ -0.2
RAE1P78406 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC13.83□□□□□ -0.2
RAE1P78406 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC13.83□□□□□ -0.2
RAE1P78406 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
RAE1P78406 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC13.83□□□□□ -0.2
RAE1P78406 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
RAE1P78406 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
RAE1P78406 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC13.83□□□□□ -0.2
RAE1P78406 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
RAE1P78406 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
RAE1P78406 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
RAE1P78406 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RAE1P78406 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RAE1P78406 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
RAE1P78406 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
RAE1P78406 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC13.83□□□□□ -0.2
RAE1P78406 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
RAE1P78406 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RAE1P78406 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
RAE1P78406 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
RAE1P78406 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC13.82□□□□□ -0.2
RAE1P78406 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
RAE1P78406 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC13.82□□□□□ -0.2
RAE1P78406 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
RAE1P78406 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RAE1P78406 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RAE1P78406 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC13.82□□□□□ -0.2
RAE1P78406 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RAE1P78406 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RAE1P78406 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
RAE1P78406 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC13.82□□□□□ -0.2
RAE1P78406 REXO1L6P-201ENST00000603433 1515 ntBASIC13.82□□□□□ -0.2
RAE1P78406 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RAE1P78406 TPO-206ENST00000382269 1155 ntTSL 5 BASIC13.82□□□□□ -0.2
RAE1P78406 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC13.82□□□□□ -0.2
RAE1P78406 BOLA2P3-201ENST00000404566 256 ntBASIC13.82□□□□□ -0.2
RAE1P78406 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
RAE1P78406 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
RAE1P78406 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC13.82□□□□□ -0.2
RAE1P78406 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC13.82□□□□□ -0.2
RAE1P78406 MIR6720-201ENST00000611664 98 ntBASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms