Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC12.75□□□□□ -0.37
UBA52P62987 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
UBA52P62987 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
UBA52P62987 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC12.75□□□□□ -0.37
UBA52P62987 KRT8P22-201ENST00000562317 1415 ntBASIC12.75□□□□□ -0.37
UBA52P62987 Z97205.2-201ENST00000564697 1639 ntBASIC12.75□□□□□ -0.37
UBA52P62987 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC12.75□□□□□ -0.37
UBA52P62987 MIR4313-201ENST00000580760 101 ntBASIC12.75□□□□□ -0.37
UBA52P62987 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC12.75□□□□□ -0.37
UBA52P62987 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC12.75□□□□□ -0.37
UBA52P62987 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
UBA52P62987 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC12.75□□□□□ -0.37
UBA52P62987 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
UBA52P62987 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC12.75□□□□□ -0.37
UBA52P62987 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
UBA52P62987 AC133539.2-201ENST00000604757 467 ntBASIC12.75□□□□□ -0.37
UBA52P62987 AL606495.2-201ENST00000605867 535 ntBASIC12.75□□□□□ -0.37
UBA52P62987 AC055811.4-201ENST00000624039 1754 ntBASIC12.75□□□□□ -0.37
UBA52P62987 CU634019.7-201ENST00000624153 1185 ntBASIC12.75□□□□□ -0.37
UBA52P62987 FP236241.2-201ENST00000624906 1185 ntBASIC12.75□□□□□ -0.37
UBA52P62987 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
UBA52P62987 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
UBA52P62987 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC12.75□□□□□ -0.37
UBA52P62987 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
UBA52P62987 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
UBA52P62987 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
UBA52P62987 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
UBA52P62987 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
UBA52P62987 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
UBA52P62987 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC12.75□□□□□ -0.37
UBA52P62987 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
UBA52P62987 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
UBA52P62987 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
UBA52P62987 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
UBA52P62987 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
UBA52P62987 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
UBA52P62987 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC12.74□□□□□ -0.37
UBA52P62987 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
UBA52P62987 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
UBA52P62987 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC12.74□□□□□ -0.37
UBA52P62987 AC073548.1-201ENST00000624088 1882 ntBASIC12.74□□□□□ -0.37
UBA52P62987 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
UBA52P62987 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
UBA52P62987 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC12.74□□□□□ -0.37
UBA52P62987 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
UBA52P62987 AMT-224ENST00000635808 1610 ntTSL 5 BASIC12.74□□□□□ -0.37
UBA52P62987 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC12.74□□□□□ -0.37
UBA52P62987 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
UBA52P62987 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
UBA52P62987 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
UBA52P62987 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
UBA52P62987 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
UBA52P62987 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC12.74□□□□□ -0.37
UBA52P62987 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
UBA52P62987 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
UBA52P62987 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
UBA52P62987 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
UBA52P62987 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
UBA52P62987 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
UBA52P62987 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
UBA52P62987 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
UBA52P62987 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
UBA52P62987 LBX2-201ENST00000341396 886 ntTSL 3 BASIC12.74□□□□□ -0.37
UBA52P62987 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
UBA52P62987 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
UBA52P62987 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
UBA52P62987 STX1A-203ENST00000395155 783 ntTSL 2 BASIC12.74□□□□□ -0.37
UBA52P62987 RAC2-202ENST00000401529 569 ntTSL 4 BASIC12.74□□□□□ -0.37
UBA52P62987 AL442647.2-201ENST00000429864 857 ntBASIC12.74□□□□□ -0.37
UBA52P62987 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
UBA52P62987 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
UBA52P62987 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
UBA52P62987 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC12.74□□□□□ -0.37
UBA52P62987 KLF2P4-201ENST00000451959 1225 ntBASIC12.74□□□□□ -0.37
UBA52P62987 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC12.74□□□□□ -0.37
UBA52P62987 CTBP2P5-201ENST00000454986 1264 ntBASIC12.74□□□□□ -0.37
UBA52P62987 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC12.74□□□□□ -0.37
UBA52P62987 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC12.74□□□□□ -0.37
UBA52P62987 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC12.74□□□□□ -0.37
UBA52P62987 SLC25A47P1-201ENST00000531577 414 ntBASIC12.74□□□□□ -0.37
UBA52P62987 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC12.74□□□□□ -0.37
UBA52P62987 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC12.74□□□□□ -0.37
UBA52P62987 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC12.74□□□□□ -0.37
UBA52P62987 RN7SL219P-201ENST00000582872 296 ntBASIC12.74□□□□□ -0.37
UBA52P62987 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
UBA52P62987 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC12.74□□□□□ -0.37
UBA52P62987 LINC01115-203ENST00000606068 577 ntBASIC12.74□□□□□ -0.37
UBA52P62987 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC12.74□□□□□ -0.37
UBA52P62987 RPSAP52-203ENST00000622976 1023 ntBASIC12.74□□□□□ -0.37
UBA52P62987 ABBA01031660.1-201ENST00000635219 756 ntBASIC12.74□□□□□ -0.37
UBA52P62987 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
UBA52P62987 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
UBA52P62987 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
UBA52P62987 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC12.74□□□□□ -0.37
UBA52P62987 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC12.74□□□□□ -0.37
UBA52P62987 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
UBA52P62987 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC12.74□□□□□ -0.37
UBA52P62987 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.37
UBA52P62987 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC12.74□□□□□ -0.37
UBA52P62987 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms