Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC13.37□□□□□ -0.27
CXCR4P61073 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
CXCR4P61073 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CXCR4P61073 AL139400.1-201ENST00000366220 510 ntBASIC13.37□□□□□ -0.27
CXCR4P61073 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
CXCR4P61073 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CXCR4P61073 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC13.37□□□□□ -0.27
CXCR4P61073 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CXCR4P61073 SERF2-209ENST00000409646 559 ntTSL 4 BASIC13.37□□□□□ -0.27
CXCR4P61073 AC114501.2-201ENST00000439631 535 ntBASIC13.37□□□□□ -0.27
CXCR4P61073 MEIS3P1-201ENST00000495167 958 ntBASIC13.37□□□□□ -0.27
CXCR4P61073 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CXCR4P61073 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC13.37□□□□□ -0.27
CXCR4P61073 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC13.37□□□□□ -0.27
CXCR4P61073 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
CXCR4P61073 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CXCR4P61073 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
CXCR4P61073 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC13.37□□□□□ -0.27
CXCR4P61073 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC13.37□□□□□ -0.27
CXCR4P61073 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CXCR4P61073 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC13.37□□□□□ -0.27
CXCR4P61073 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
CXCR4P61073 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC13.37□□□□□ -0.27
CXCR4P61073 KRT33B-201ENST00000251646 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CXCR4P61073 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
CXCR4P61073 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
CXCR4P61073 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC13.37□□□□□ -0.27
CXCR4P61073 EWSAT1-201ENST00000415504 2214 ntTSL 2 BASIC13.37□□□□□ -0.27
CXCR4P61073 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC13.37□□□□□ -0.27
CXCR4P61073 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CXCR4P61073 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CXCR4P61073 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
CXCR4P61073 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CXCR4P61073 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
CXCR4P61073 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
CXCR4P61073 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC13.37□□□□□ -0.27
CXCR4P61073 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CXCR4P61073 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
CXCR4P61073 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CXCR4P61073 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC13.37□□□□□ -0.27
CXCR4P61073 AL355102.3-201ENST00000554299 1678 ntBASIC13.37□□□□□ -0.27
CXCR4P61073 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CXCR4P61073 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CXCR4P61073 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
CXCR4P61073 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC13.37□□□□□ -0.27
CXCR4P61073 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
CXCR4P61073 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC13.37□□□□□ -0.27
CXCR4P61073 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC13.37□□□□□ -0.27
CXCR4P61073 AL031595.1-201ENST00000623969 4709 ntBASIC13.37□□□□□ -0.27
CXCR4P61073 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CXCR4P61073 AL139385.1-201ENST00000611744 3272 ntBASIC13.37□□□□□ -0.27
CXCR4P61073 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CXCR4P61073 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC13.36□□□□□ -0.27
CXCR4P61073 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC13.36□□□□□ -0.27
CXCR4P61073 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CXCR4P61073 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
CXCR4P61073 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CXCR4P61073 AC003102.2-201ENST00000589195 1469 ntBASIC13.36□□□□□ -0.27
CXCR4P61073 ING4-201ENST00000341550 1709 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
CXCR4P61073 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC13.36□□□□□ -0.27
CXCR4P61073 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CXCR4P61073 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CXCR4P61073 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CXCR4P61073 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CXCR4P61073 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC13.36□□□□□ -0.27
CXCR4P61073 LRRC17-201ENST00000249377 2002 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CXCR4P61073 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CXCR4P61073 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CXCR4P61073 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CXCR4P61073 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC13.36□□□□□ -0.27
CXCR4P61073 AC092580.3-201ENST00000430932 139 ntBASIC13.36□□□□□ -0.27
CXCR4P61073 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC13.36□□□□□ -0.27
CXCR4P61073 AC004967.1-201ENST00000453589 447 ntBASIC13.36□□□□□ -0.27
CXCR4P61073 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC13.36□□□□□ -0.27
CXCR4P61073 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
CXCR4P61073 AC131206.1-201ENST00000538078 1211 ntBASIC13.36□□□□□ -0.27
CXCR4P61073 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC13.36□□□□□ -0.27
CXCR4P61073 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC13.36□□□□□ -0.27
CXCR4P61073 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
CXCR4P61073 AC103988.2-201ENST00000561804 725 ntBASIC13.36□□□□□ -0.27
CXCR4P61073 AC025678.2-201ENST00000562061 970 ntBASIC13.36□□□□□ -0.27
CXCR4P61073 AC004449.1-201ENST00000564240 433 ntBASIC13.36□□□□□ -0.27
CXCR4P61073 AL603764.1-201ENST00000636452 321 ntBASIC13.36□□□□□ -0.27
CXCR4P61073 PRSS30P-206ENST00000641773 873 ntBASIC13.36□□□□□ -0.27
CXCR4P61073 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CXCR4P61073 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
CXCR4P61073 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CXCR4P61073 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CXCR4P61073 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CXCR4P61073 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
CXCR4P61073 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CXCR4P61073 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CXCR4P61073 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC13.36□□□□□ -0.27
CXCR4P61073 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CXCR4P61073 AC100757.3-201ENST00000622361 1406 ntBASIC13.36□□□□□ -0.27
CXCR4P61073 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CXCR4P61073 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CXCR4P61073 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC13.36□□□□□ -0.27
CXCR4P61073 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
CXCR4P61073 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms