Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
LIMK2P53671 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC14.79□□□□□ -0.04
LIMK2P53671 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC14.79□□□□□ -0.04
LIMK2P53671 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LIMK2P53671 AC138951.2-201ENST00000623455 1161 ntBASIC14.79□□□□□ -0.04
LIMK2P53671 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC14.79□□□□□ -0.04
LIMK2P53671 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
LIMK2P53671 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LIMK2P53671 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LIMK2P53671 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC14.79□□□□□ -0.04
LIMK2P53671 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
LIMK2P53671 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LIMK2P53671 AC011498.7-201ENST00000624986 2027 ntBASIC14.78□□□□□ -0.04
LIMK2P53671 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
LIMK2P53671 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
LIMK2P53671 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LIMK2P53671 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LIMK2P53671 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LIMK2P53671 AL133338.1-201ENST00000565695 1517 ntBASIC14.78□□□□□ -0.04
LIMK2P53671 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
LIMK2P53671 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
LIMK2P53671 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LIMK2P53671 FOS-202ENST00000535987 1402 ntTSL 2 BASIC14.78□□□□□ -0.04
LIMK2P53671 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
LIMK2P53671 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LIMK2P53671 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC14.78□□□□□ -0.04
LIMK2P53671 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
LIMK2P53671 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
LIMK2P53671 AHCYP2-201ENST00000430630 1300 ntBASIC14.78□□□□□ -0.04
LIMK2P53671 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LIMK2P53671 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LIMK2P53671 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LIMK2P53671 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LIMK2P53671 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
LIMK2P53671 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LIMK2P53671 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
LIMK2P53671 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LIMK2P53671 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC14.78□□□□□ -0.04
LIMK2P53671 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC14.78□□□□□ -0.04
LIMK2P53671 RNA5SP486-201ENST00000515961 83 ntBASIC14.78□□□□□ -0.04
LIMK2P53671 CD74-212ENST00000524315 584 ntTSL 5 BASIC14.78□□□□□ -0.04
LIMK2P53671 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LIMK2P53671 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC14.78□□□□□ -0.04
LIMK2P53671 AC138696.2-201ENST00000607376 223 ntBASIC14.78□□□□□ -0.04
LIMK2P53671 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC14.78□□□□□ -0.04
LIMK2P53671 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC14.78□□□□□ -0.04
LIMK2P53671 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LIMK2P53671 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
LIMK2P53671 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LIMK2P53671 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LIMK2P53671 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC14.78□□□□□ -0.04
LIMK2P53671 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC14.78□□□□□ -0.04
LIMK2P53671 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
LIMK2P53671 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LIMK2P53671 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LIMK2P53671 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LIMK2P53671 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LIMK2P53671 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LIMK2P53671 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
LIMK2P53671 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
LIMK2P53671 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
LIMK2P53671 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
LIMK2P53671 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
LIMK2P53671 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.04
LIMK2P53671 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
LIMK2P53671 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
LIMK2P53671 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC14.77□□□□□ -0.04
LIMK2P53671 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
LIMK2P53671 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC14.77□□□□□ -0.04
LIMK2P53671 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC14.77□□□□□ -0.04
LIMK2P53671 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
LIMK2P53671 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.04
LIMK2P53671 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LIMK2P53671 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC14.77□□□□□ -0.05
LIMK2P53671 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC14.77□□□□□ -0.05
LIMK2P53671 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC14.77□□□□□ -0.05
LIMK2P53671 CD8B2-202ENST00000417670 633 ntBASIC14.77□□□□□ -0.05
LIMK2P53671 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
LIMK2P53671 OLR1-203ENST00000432556 950 ntTSL 2 BASIC14.77□□□□□ -0.05
LIMK2P53671 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC14.77□□□□□ -0.05
LIMK2P53671 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC14.77□□□□□ -0.05
LIMK2P53671 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LIMK2P53671 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC14.77□□□□□ -0.05
LIMK2P53671 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LIMK2P53671 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC14.77□□□□□ -0.05
LIMK2P53671 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LIMK2P53671 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC14.77□□□□□ -0.05
LIMK2P53671 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC14.77□□□□□ -0.05
LIMK2P53671 AC103988.2-201ENST00000561804 725 ntBASIC14.77□□□□□ -0.05
LIMK2P53671 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC14.77□□□□□ -0.05
LIMK2P53671 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC14.77□□□□□ -0.05
LIMK2P53671 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LIMK2P53671 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
LIMK2P53671 AP001002.3-201ENST00000623482 206 ntBASIC14.77□□□□□ -0.05
LIMK2P53671 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC14.77□□□□□ -0.05
LIMK2P53671 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
LIMK2P53671 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LIMK2P53671 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
LIMK2P53671 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
LIMK2P53671 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms