Protein–RNA interactions for Protein: P50553

ASCL1, Achaete-scute homolog 1, humanhuman

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ASCL1P50553 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.31
ASCL1P50553 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
ASCL1P50553 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC13.08□□□□□ -0.31
ASCL1P50553 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.31
ASCL1P50553 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ASCL1P50553 C18orf15-201ENST00000623680 2534 ntBASIC13.08□□□□□ -0.32
ASCL1P50553 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
ASCL1P50553 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC13.08□□□□□ -0.32
ASCL1P50553 SLC9A7P1-202ENST00000556476 2239 ntBASIC13.08□□□□□ -0.32
ASCL1P50553 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ASCL1P50553 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC13.08□□□□□ -0.32
ASCL1P50553 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ASCL1P50553 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
ASCL1P50553 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
ASCL1P50553 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ASCL1P50553 RN7SKP230-201ENST00000365642 335 ntBASIC13.08□□□□□ -0.32
ASCL1P50553 GGCT-203ENST00000409144 836 ntTSL 2 BASIC13.08□□□□□ -0.32
ASCL1P50553 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC13.08□□□□□ -0.32
ASCL1P50553 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
ASCL1P50553 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC13.08□□□□□ -0.32
ASCL1P50553 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC13.08□□□□□ -0.32
ASCL1P50553 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC13.08□□□□□ -0.32
ASCL1P50553 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC13.08□□□□□ -0.32
ASCL1P50553 RPL18P13-201ENST00000478088 569 ntBASIC13.08□□□□□ -0.32
ASCL1P50553 TMEM198B-204ENST00000484016 896 ntBASIC13.08□□□□□ -0.32
ASCL1P50553 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC13.08□□□□□ -0.32
ASCL1P50553 AC090857.1-201ENST00000527400 390 ntBASIC13.08□□□□□ -0.32
ASCL1P50553 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC13.08□□□□□ -0.32
ASCL1P50553 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
ASCL1P50553 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC13.08□□□□□ -0.32
ASCL1P50553 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC13.08□□□□□ -0.32
ASCL1P50553 MIR4783-201ENST00000580343 82 ntBASIC13.08□□□□□ -0.32
ASCL1P50553 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC13.08□□□□□ -0.32
ASCL1P50553 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
ASCL1P50553 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC13.08□□□□□ -0.32
ASCL1P50553 AP000346.4-201ENST00000614827 381 ntBASIC13.08□□□□□ -0.32
ASCL1P50553 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC13.08□□□□□ -0.32
ASCL1P50553 NAP1L6-202ENST00000641404 1222 ntBASIC13.08□□□□□ -0.32
ASCL1P50553 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC13.08□□□□□ -0.32
ASCL1P50553 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
ASCL1P50553 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC13.08□□□□□ -0.32
ASCL1P50553 C8orf49-201ENST00000525043 1968 ntBASIC13.08□□□□□ -0.32
ASCL1P50553 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC13.08□□□□□ -0.32
ASCL1P50553 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
ASCL1P50553 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ASCL1P50553 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ASCL1P50553 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ASCL1P50553 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC13.08□□□□□ -0.32
ASCL1P50553 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
ASCL1P50553 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ASCL1P50553 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ASCL1P50553 INE2-201ENST00000630399 1874 ntBASIC13.08□□□□□ -0.32
ASCL1P50553 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
ASCL1P50553 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
ASCL1P50553 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
ASCL1P50553 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ASCL1P50553 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ASCL1P50553 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC13.07□□□□□ -0.32
ASCL1P50553 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ASCL1P50553 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ASCL1P50553 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ASCL1P50553 MARS-233ENST00000628866 2583 ntTSL 5 BASIC13.07□□□□□ -0.32
ASCL1P50553 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ASCL1P50553 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC13.07□□□□□ -0.32
ASCL1P50553 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
ASCL1P50553 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC13.07□□□□□ -0.32
ASCL1P50553 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
ASCL1P50553 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC13.07□□□□□ -0.32
ASCL1P50553 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ASCL1P50553 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ASCL1P50553 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
ASCL1P50553 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
ASCL1P50553 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ASCL1P50553 AL353637.1-201ENST00000451571 732 ntBASIC13.07□□□□□ -0.32
ASCL1P50553 AC012618.1-201ENST00000461223 412 ntBASIC13.07□□□□□ -0.32
ASCL1P50553 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC13.07□□□□□ -0.32
ASCL1P50553 AC134698.3-201ENST00000523880 214 ntBASIC13.07□□□□□ -0.32
ASCL1P50553 RN7SL574P-201ENST00000581512 297 ntBASIC13.07□□□□□ -0.32
ASCL1P50553 AC009884.2-201ENST00000603110 324 ntBASIC13.07□□□□□ -0.32
ASCL1P50553 AL132994.2-201ENST00000603120 687 ntBASIC13.07□□□□□ -0.32
ASCL1P50553 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC13.07□□□□□ -0.32
ASCL1P50553 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC13.07□□□□□ -0.32
ASCL1P50553 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ASCL1P50553 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
ASCL1P50553 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
ASCL1P50553 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ASCL1P50553 AC020910.5-201ENST00000623668 1865 ntBASIC13.07□□□□□ -0.32
ASCL1P50553 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC13.07□□□□□ -0.32
ASCL1P50553 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
ASCL1P50553 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
ASCL1P50553 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ASCL1P50553 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
ASCL1P50553 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
ASCL1P50553 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ASCL1P50553 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
ASCL1P50553 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ASCL1P50553 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
ASCL1P50553 AL008718.2-201ENST00000609206 1313 ntBASIC13.07□□□□□ -0.32
ASCL1P50553 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ASCL1P50553 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms