Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CSNK1A1P48729 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
CSNK1A1P48729 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
CSNK1A1P48729 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
CSNK1A1P48729 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC13.07□□□□□ -0.32
CSNK1A1P48729 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
CSNK1A1P48729 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CSNK1A1P48729 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC13.07□□□□□ -0.32
CSNK1A1P48729 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
CSNK1A1P48729 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC13.07□□□□□ -0.32
CSNK1A1P48729 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CSNK1A1P48729 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CSNK1A1P48729 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC13.07□□□□□ -0.32
CSNK1A1P48729 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
CSNK1A1P48729 AL590440.2-201ENST00000641973 1595 ntBASIC13.07□□□□□ -0.32
CSNK1A1P48729 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
CSNK1A1P48729 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CSNK1A1P48729 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
CSNK1A1P48729 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC13.06□□□□□ -0.32
CSNK1A1P48729 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CSNK1A1P48729 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CSNK1A1P48729 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CSNK1A1P48729 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC13.06□□□□□ -0.32
CSNK1A1P48729 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CSNK1A1P48729 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CSNK1A1P48729 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CSNK1A1P48729 DKFZP434A062-201ENST00000573103 5021 ntBASIC13.06□□□□□ -0.32
CSNK1A1P48729 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CSNK1A1P48729 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC13.06□□□□□ -0.32
CSNK1A1P48729 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CSNK1A1P48729 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CSNK1A1P48729 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC13.06□□□□□ -0.32
CSNK1A1P48729 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
CSNK1A1P48729 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC13.06□□□□□ -0.32
CSNK1A1P48729 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CSNK1A1P48729 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC13.06□□□□□ -0.32
CSNK1A1P48729 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
CSNK1A1P48729 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CSNK1A1P48729 AC006504.5-208ENST00000588784 2401 ntBASIC13.06□□□□□ -0.32
CSNK1A1P48729 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
CSNK1A1P48729 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CSNK1A1P48729 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
CSNK1A1P48729 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CSNK1A1P48729 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CSNK1A1P48729 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CSNK1A1P48729 MIR1909-201ENST00000411312 80 ntBASIC13.06□□□□□ -0.32
CSNK1A1P48729 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC13.06□□□□□ -0.32
CSNK1A1P48729 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC13.06□□□□□ -0.32
CSNK1A1P48729 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC13.06□□□□□ -0.32
CSNK1A1P48729 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CSNK1A1P48729 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC13.06□□□□□ -0.32
CSNK1A1P48729 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
CSNK1A1P48729 AL035414.1-201ENST00000451327 857 ntBASIC13.06□□□□□ -0.32
CSNK1A1P48729 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CSNK1A1P48729 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CSNK1A1P48729 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC13.06□□□□□ -0.32
CSNK1A1P48729 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC13.06□□□□□ -0.32
CSNK1A1P48729 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
CSNK1A1P48729 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC13.06□□□□□ -0.32
CSNK1A1P48729 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
CSNK1A1P48729 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC13.06□□□□□ -0.32
CSNK1A1P48729 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC13.06□□□□□ -0.32
CSNK1A1P48729 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CSNK1A1P48729 AC008825.2-201ENST00000603374 718 ntBASIC13.06□□□□□ -0.32
CSNK1A1P48729 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CSNK1A1P48729 CNTNAP3P2-201ENST00000617175 3861 ntBASIC13.06□□□□□ -0.32
CSNK1A1P48729 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CSNK1A1P48729 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
CSNK1A1P48729 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
CSNK1A1P48729 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
CSNK1A1P48729 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CSNK1A1P48729 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CSNK1A1P48729 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CSNK1A1P48729 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
CSNK1A1P48729 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
CSNK1A1P48729 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CSNK1A1P48729 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CSNK1A1P48729 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
CSNK1A1P48729 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CSNK1A1P48729 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC13.05□□□□□ -0.32
CSNK1A1P48729 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
CSNK1A1P48729 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CSNK1A1P48729 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CSNK1A1P48729 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CSNK1A1P48729 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CSNK1A1P48729 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
CSNK1A1P48729 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
CSNK1A1P48729 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC13.05□□□□□ -0.32
CSNK1A1P48729 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
CSNK1A1P48729 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
CSNK1A1P48729 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CSNK1A1P48729 AC215219.1-201ENST00000400706 1817 ntBASIC13.05□□□□□ -0.32
CSNK1A1P48729 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC13.05□□□□□ -0.32
CSNK1A1P48729 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CSNK1A1P48729 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CSNK1A1P48729 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CSNK1A1P48729 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC13.05□□□□□ -0.32
CSNK1A1P48729 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CSNK1A1P48729 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC13.05□□□□□ -0.32
CSNK1A1P48729 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms