Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CHRNA4P43681 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC14.76□□□□□ -0.05
CHRNA4P43681 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CHRNA4P43681 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
CHRNA4P43681 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
CHRNA4P43681 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
CHRNA4P43681 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CHRNA4P43681 TMBIM7P-202ENST00000641474 1516 ntBASIC14.76□□□□□ -0.05
CHRNA4P43681 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC14.76□□□□□ -0.05
CHRNA4P43681 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CHRNA4P43681 AC009093.10-201ENST00000641956 1442 ntBASIC14.75□□□□□ -0.05
CHRNA4P43681 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CHRNA4P43681 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CHRNA4P43681 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CHRNA4P43681 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CHRNA4P43681 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CHRNA4P43681 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC14.75□□□□□ -0.05
CHRNA4P43681 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CHRNA4P43681 HPD-204ENST00000543163 1709 ntTSL 5 BASIC14.75□□□□□ -0.05
CHRNA4P43681 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CHRNA4P43681 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CHRNA4P43681 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CHRNA4P43681 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CHRNA4P43681 AC244394.1-201ENST00000435000 1665 ntBASIC14.75□□□□□ -0.05
CHRNA4P43681 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
CHRNA4P43681 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC14.75□□□□□ -0.05
CHRNA4P43681 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC14.75□□□□□ -0.05
CHRNA4P43681 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC14.75□□□□□ -0.05
CHRNA4P43681 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC14.75□□□□□ -0.05
CHRNA4P43681 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CHRNA4P43681 MST1P2-201ENST00000457982 2291 ntBASIC14.75□□□□□ -0.05
CHRNA4P43681 ST20-AS1-201ENST00000560255 4223 ntBASIC14.75□□□□□ -0.05
CHRNA4P43681 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
CHRNA4P43681 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC14.75□□□□□ -0.05
CHRNA4P43681 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
CHRNA4P43681 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC14.75□□□□□ -0.05
CHRNA4P43681 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC14.75□□□□□ -0.05
CHRNA4P43681 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
CHRNA4P43681 AL035414.1-201ENST00000451327 857 ntBASIC14.75□□□□□ -0.05
CHRNA4P43681 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CHRNA4P43681 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC14.75□□□□□ -0.05
CHRNA4P43681 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC14.75□□□□□ -0.05
CHRNA4P43681 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
CHRNA4P43681 AC027237.1-201ENST00000560942 655 ntBASIC14.75□□□□□ -0.05
CHRNA4P43681 DUX4L45-201ENST00000566406 1057 ntBASIC14.75□□□□□ -0.05
CHRNA4P43681 EEF1DP1-201ENST00000585891 896 ntBASIC14.75□□□□□ -0.05
CHRNA4P43681 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC14.75□□□□□ -0.05
CHRNA4P43681 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC14.75□□□□□ -0.05
CHRNA4P43681 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
CHRNA4P43681 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC14.75□□□□□ -0.05
CHRNA4P43681 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC14.75□□□□□ -0.05
CHRNA4P43681 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CHRNA4P43681 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CHRNA4P43681 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
CHRNA4P43681 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CHRNA4P43681 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CHRNA4P43681 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CHRNA4P43681 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC14.75□□□□□ -0.05
CHRNA4P43681 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC14.75□□□□□ -0.05
CHRNA4P43681 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CHRNA4P43681 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC14.75□□□□□ -0.05
CHRNA4P43681 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CHRNA4P43681 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC14.75□□□□□ -0.05
CHRNA4P43681 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC14.75□□□□□ -0.05
CHRNA4P43681 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
CHRNA4P43681 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC14.75□□□□□ -0.05
CHRNA4P43681 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC14.75□□□□□ -0.05
CHRNA4P43681 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC14.75□□□□□ -0.05
CHRNA4P43681 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
CHRNA4P43681 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC14.75□□□□□ -0.05
CHRNA4P43681 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC14.75□□□□□ -0.05
CHRNA4P43681 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC14.75□□□□□ -0.05
CHRNA4P43681 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
CHRNA4P43681 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
CHRNA4P43681 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CHRNA4P43681 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
CHRNA4P43681 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
CHRNA4P43681 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CHRNA4P43681 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CHRNA4P43681 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CHRNA4P43681 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CHRNA4P43681 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CHRNA4P43681 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC14.74□□□□□ -0.05
CHRNA4P43681 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CHRNA4P43681 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
CHRNA4P43681 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CHRNA4P43681 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CHRNA4P43681 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC14.74□□□□□ -0.05
CHRNA4P43681 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC14.74□□□□□ -0.05
CHRNA4P43681 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
CHRNA4P43681 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CHRNA4P43681 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC14.74□□□□□ -0.05
CHRNA4P43681 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CHRNA4P43681 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC14.74□□□□□ -0.05
CHRNA4P43681 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
CHRNA4P43681 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CHRNA4P43681 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CHRNA4P43681 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CHRNA4P43681 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CHRNA4P43681 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms