Protein–RNA interactions for Protein: P17655

CAPN2, Calpain-2 catalytic subunit, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN2P17655 STUB1-204ENST00000564370 875 ntTSL 2 BASIC16.96■□□□□ 0.31
CAPN2P17655 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC16.96■□□□□ 0.31
CAPN2P17655 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
CAPN2P17655 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC16.96■□□□□ 0.31
CAPN2P17655 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC16.96■□□□□ 0.31
CAPN2P17655 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC16.96■□□□□ 0.31
CAPN2P17655 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC16.96■□□□□ 0.31
CAPN2P17655 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CAPN2P17655 FAM90A2P-201ENST00000511144 1395 ntBASIC16.96■□□□□ 0.31
CAPN2P17655 FAM90A25P-201ENST00000528404 1395 ntBASIC16.96■□□□□ 0.31
CAPN2P17655 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CAPN2P17655 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC16.96■□□□□ 0.31
CAPN2P17655 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
CAPN2P17655 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
CAPN2P17655 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC16.96■□□□□ 0.31
CAPN2P17655 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
CAPN2P17655 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC16.96■□□□□ 0.31
CAPN2P17655 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CAPN2P17655 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CAPN2P17655 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
CAPN2P17655 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CAPN2P17655 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CAPN2P17655 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
CAPN2P17655 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CAPN2P17655 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CAPN2P17655 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CAPN2P17655 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
CAPN2P17655 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
CAPN2P17655 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC16.95■□□□□ 0.3
CAPN2P17655 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
CAPN2P17655 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC16.95■□□□□ 0.3
CAPN2P17655 AC020658.6-201ENST00000623564 1870 ntBASIC16.95■□□□□ 0.3
CAPN2P17655 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CAPN2P17655 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
CAPN2P17655 AP003680.1-201ENST00000598970 3660 ntBASIC16.95■□□□□ 0.3
CAPN2P17655 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CAPN2P17655 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CAPN2P17655 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CAPN2P17655 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CAPN2P17655 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CAPN2P17655 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
CAPN2P17655 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CAPN2P17655 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CAPN2P17655 MIR648-201ENST00000385046 94 ntBASIC16.95■□□□□ 0.3
CAPN2P17655 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC16.95■□□□□ 0.3
CAPN2P17655 HNRNPA1P41-201ENST00000397777 928 ntBASIC16.95■□□□□ 0.3
CAPN2P17655 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC16.95■□□□□ 0.3
CAPN2P17655 AC012441.2-201ENST00000444843 739 ntBASIC16.95■□□□□ 0.3
CAPN2P17655 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC16.95■□□□□ 0.3
CAPN2P17655 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC16.95■□□□□ 0.3
CAPN2P17655 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CAPN2P17655 AC009955.4-201ENST00000597192 544 ntBASIC16.95■□□□□ 0.3
CAPN2P17655 PCBP2-OT1-201ENST00000634357 590 ntBASIC16.95■□□□□ 0.3
CAPN2P17655 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC16.95■□□□□ 0.3
CAPN2P17655 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC16.95■□□□□ 0.3
CAPN2P17655 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CAPN2P17655 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CAPN2P17655 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
CAPN2P17655 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC16.95■□□□□ 0.3
CAPN2P17655 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC16.95■□□□□ 0.3
CAPN2P17655 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CAPN2P17655 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
CAPN2P17655 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CAPN2P17655 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CAPN2P17655 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC16.95■□□□□ 0.3
CAPN2P17655 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CAPN2P17655 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC16.95■□□□□ 0.3
CAPN2P17655 AC232323.1-201ENST00000540724 2099 ntBASIC16.95■□□□□ 0.3
CAPN2P17655 REXO1L5P-201ENST00000622260 2098 ntBASIC16.95■□□□□ 0.3
CAPN2P17655 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CAPN2P17655 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CAPN2P17655 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
CAPN2P17655 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CAPN2P17655 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC16.95■□□□□ 0.3
CAPN2P17655 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CAPN2P17655 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CAPN2P17655 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CAPN2P17655 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC16.94■□□□□ 0.3
CAPN2P17655 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC16.94■□□□□ 0.3
CAPN2P17655 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CAPN2P17655 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CAPN2P17655 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
CAPN2P17655 CICP17-201ENST00000418553 2377 ntBASIC16.94■□□□□ 0.3
CAPN2P17655 DKFZP434H168-201ENST00000567381 1905 ntBASIC16.94■□□□□ 0.3
CAPN2P17655 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CAPN2P17655 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC16.94■□□□□ 0.3
CAPN2P17655 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC16.94■□□□□ 0.3
CAPN2P17655 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC16.94■□□□□ 0.3
CAPN2P17655 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CAPN2P17655 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CAPN2P17655 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CAPN2P17655 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
CAPN2P17655 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CAPN2P17655 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CAPN2P17655 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CAPN2P17655 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC16.94■□□□□ 0.3
CAPN2P17655 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CAPN2P17655 SERF2-206ENST00000409291 807 ntTSL 3 BASIC16.94■□□□□ 0.3
CAPN2P17655 KRT18P66-201ENST00000452970 1269 ntBASIC16.94■□□□□ 0.3
CAPN2P17655 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms