Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 KHDRBS3-206ENST00000520981 1243 ntTSL 5 BASIC24.06■■□□□ 1.44
CFTRP13569 AP000640.1-201ENST00000525337 879 ntTSL 2 BASIC24.06■■□□□ 1.44
CFTRP13569 SRRM2-AS1-204ENST00000573802 818 ntTSL 2 BASIC24.06■■□□□ 1.44
CFTRP13569 AP001094.3-201ENST00000580491 616 ntTSL 2 BASIC24.06■■□□□ 1.44
CFTRP13569 OR2T8-202ENST00000641945 1226 ntAPPRIS P1 BASIC24.06■■□□□ 1.44
CFTRP13569 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
CFTRP13569 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC24.05■■□□□ 1.44
CFTRP13569 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC24.05■■□□□ 1.44
CFTRP13569 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC24.05■■□□□ 1.44
CFTRP13569 AC018529.2-202ENST00000611482 3087 ntBASIC24.05■■□□□ 1.44
CFTRP13569 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC24.05■■□□□ 1.44
CFTRP13569 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC24.05■■□□□ 1.44
CFTRP13569 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
CFTRP13569 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
CFTRP13569 PSMC5-201ENST00000310144 1579 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CFTRP13569 AC011498.7-201ENST00000624986 2027 ntBASIC24.05■■□□□ 1.44
CFTRP13569 AL139158.3-201ENST00000641212 1562 ntBASIC24.05■■□□□ 1.44
CFTRP13569 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CFTRP13569 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CFTRP13569 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CFTRP13569 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC24.05■■□□□ 1.44
CFTRP13569 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CFTRP13569 TMEM60-201ENST00000257663 1023 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CFTRP13569 FAU-201ENST00000279259 461 ntTSL 2 BASIC24.05■■□□□ 1.44
CFTRP13569 XAGE2-201ENST00000286049 618 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CFTRP13569 HDGF-202ENST00000368206 960 ntTSL 5 BASIC24.05■■□□□ 1.44
CFTRP13569 PYM1-203ENST00000408946 1226 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
CFTRP13569 OR7E155P-201ENST00000412208 1014 ntBASIC24.05■■□□□ 1.44
CFTRP13569 BX072579.1-201ENST00000449453 344 ntTSL 3 BASIC24.05■■□□□ 1.44
CFTRP13569 AC004893.2-203ENST00000482799 796 ntTSL 3 BASIC24.05■■□□□ 1.44
CFTRP13569 MARK2P17-201ENST00000498560 841 ntBASIC24.05■■□□□ 1.44
CFTRP13569 SLC13A2-205ENST00000545060 1276 ntTSL 5 BASIC24.05■■□□□ 1.44
CFTRP13569 CCND3P2-201ENST00000579393 537 ntBASIC24.05■■□□□ 1.44
CFTRP13569 SEPT14P19-201ENST00000587432 336 ntTSL 2 BASIC24.05■■□□□ 1.44
CFTRP13569 AP001462.1-201ENST00000594089 452 ntBASIC24.05■■□□□ 1.44
CFTRP13569 KRTAP10-4-202ENST00000616689 597 ntAPPRIS ALT2 TSL 5 BASIC24.05■■□□□ 1.44
CFTRP13569 ADH1B-207ENST00000639454 1210 ntTSL 5 BASIC24.05■■□□□ 1.44
CFTRP13569 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CFTRP13569 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CFTRP13569 AC084018.2-201ENST00000613093 2607 ntBASIC24.05■■□□□ 1.44
CFTRP13569 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
CFTRP13569 AC008620.2-201ENST00000510294 1569 ntBASIC24.04■■□□□ 1.44
CFTRP13569 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC24.04■■□□□ 1.44
CFTRP13569 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
CFTRP13569 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
CFTRP13569 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC24.04■■□□□ 1.44
CFTRP13569 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC24.04■■□□□ 1.44
CFTRP13569 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
CFTRP13569 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
CFTRP13569 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC24.04■■□□□ 1.44
CFTRP13569 IL18BP-206ENST00000393707 1037 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
CFTRP13569 MED15P3-201ENST00000413613 326 ntBASIC24.04■■□□□ 1.44
CFTRP13569 RN7SL173P-201ENST00000461853 292 ntBASIC24.04■■□□□ 1.44
CFTRP13569 AC099328.1-201ENST00000498809 1030 ntBASIC24.04■■□□□ 1.44
CFTRP13569 SMIM15-202ENST00000507416 584 ntAPPRIS P1 TSL 2 BASIC24.04■■□□□ 1.44
CFTRP13569 AC022447.6-201ENST00000515522 438 ntBASIC24.04■■□□□ 1.44
CFTRP13569 ACER3-205ENST00000526597 1269 ntTSL 2 BASIC24.04■■□□□ 1.44
CFTRP13569 MIR4326-201ENST00000582203 59 ntBASIC24.04■■□□□ 1.44
CFTRP13569 ZNF677-210ENST00000601413 706 ntTSL 2 BASIC24.04■■□□□ 1.44
CFTRP13569 IFITM2-205ENST00000602569 605 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
CFTRP13569 Metazoa_SRP.156-201ENST00000622344 262 ntBASIC24.04■■□□□ 1.44
CFTRP13569 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
CFTRP13569 DAO-208ENST00000551281 1345 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
CFTRP13569 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC24.04■■□□□ 1.44
CFTRP13569 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
CFTRP13569 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC24.03■■□□□ 1.44
CFTRP13569 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC24.03■■□□□ 1.44
CFTRP13569 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
CFTRP13569 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CFTRP13569 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC24.03■■□□□ 1.44
CFTRP13569 MIR632-201ENST00000385193 94 ntBASIC24.03■■□□□ 1.44
CFTRP13569 RPSAP6-201ENST00000417882 882 ntBASIC24.03■■□□□ 1.44
CFTRP13569 MBP-230ENST00000528160 584 ntTSL 5 BASIC24.03■■□□□ 1.44
CFTRP13569 AC132812.1-201ENST00000583145 892 ntBASIC24.03■■□□□ 1.44
CFTRP13569 PRR20FP-201ENST00000603320 180 ntBASIC24.03■■□□□ 1.44
CFTRP13569 OAZ3-207ENST00000627780 850 ntTSL 5 BASIC24.03■■□□□ 1.44
CFTRP13569 OAZ3-209ENST00000635322 745 ntTSL 5 BASIC24.03■■□□□ 1.44
CFTRP13569 PPP1R32-201ENST00000338608 1535 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CFTRP13569 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC24.03■■□□□ 1.44
CFTRP13569 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC24.03■■□□□ 1.44
CFTRP13569 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC24.03■■□□□ 1.44
CFTRP13569 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC24.03■■□□□ 1.44
CFTRP13569 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CFTRP13569 NME7-203ENST00000472647 1590 ntAPPRIS ALT2 TSL 2 BASIC24.02■■□□□ 1.44
CFTRP13569 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC24.02■■□□□ 1.44
CFTRP13569 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
CFTRP13569 SPATS1-202ENST00000323108 1107 ntAPPRIS P2 TSL 5 BASIC24.02■■□□□ 1.44
CFTRP13569 IL1F10-201ENST00000341010 1013 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CFTRP13569 AC011284.1-201ENST00000427920 856 ntTSL 4 BASIC24.02■■□□□ 1.44
CFTRP13569 TTTY18-201ENST00000438677 221 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
CFTRP13569 LINC01502-203ENST00000447907 880 ntTSL 3 BASIC24.02■■□□□ 1.44
CFTRP13569 PRSS55-203ENST00000522210 1005 ntTSL 2 BASIC24.02■■□□□ 1.44
CFTRP13569 AC093510.1-202ENST00000546238 442 ntTSL 3 BASIC24.02■■□□□ 1.44
CFTRP13569 BLOC1S1-203ENST00000548925 571 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CFTRP13569 MARS-233ENST00000628866 2583 ntTSL 5 BASIC24.02■■□□□ 1.44
CFTRP13569 AJ011931.1-201ENST00000618749 2492 ntBASIC24.02■■□□□ 1.44
CFTRP13569 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC24.02■■□□□ 1.44
CFTRP13569 MAGEC3-205ENST00000544766 1707 ntAPPRIS ALT2 TSL 5 BASIC24.02■■□□□ 1.44
CFTRP13569 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CFTRP13569 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC24.02■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms