Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC13.8□□□□□ -0.2
RAB40ALP0C0E4 AC006453.1-201ENST00000636037 1257 ntBASIC13.8□□□□□ -0.2
RAB40ALP0C0E4 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
RAB40ALP0C0E4 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RAB40ALP0C0E4 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC13.8□□□□□ -0.2
RAB40ALP0C0E4 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC13.8□□□□□ -0.2
RAB40ALP0C0E4 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
RAB40ALP0C0E4 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
RAB40ALP0C0E4 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
RAB40ALP0C0E4 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
RAB40ALP0C0E4 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
RAB40ALP0C0E4 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RAB40ALP0C0E4 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RAB40ALP0C0E4 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC13.8□□□□□ -0.2
RAB40ALP0C0E4 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
RAB40ALP0C0E4 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RAB40ALP0C0E4 KRT8P21-201ENST00000430398 1491 ntBASIC13.8□□□□□ -0.2
RAB40ALP0C0E4 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RAB40ALP0C0E4 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
RAB40ALP0C0E4 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RAB40ALP0C0E4 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC13.79□□□□□ -0.2
RAB40ALP0C0E4 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
RAB40ALP0C0E4 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
RAB40ALP0C0E4 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RAB40ALP0C0E4 AC067750.1-201ENST00000608826 6545 ntBASIC13.79□□□□□ -0.2
RAB40ALP0C0E4 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RAB40ALP0C0E4 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
RAB40ALP0C0E4 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
RAB40ALP0C0E4 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RAB40ALP0C0E4 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC13.79□□□□□ -0.2
RAB40ALP0C0E4 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RAB40ALP0C0E4 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
RAB40ALP0C0E4 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
RAB40ALP0C0E4 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RAB40ALP0C0E4 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RAB40ALP0C0E4 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC13.79□□□□□ -0.2
RAB40ALP0C0E4 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
RAB40ALP0C0E4 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RAB40ALP0C0E4 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
RAB40ALP0C0E4 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RAB40ALP0C0E4 GGCT-203ENST00000409144 836 ntTSL 2 BASIC13.79□□□□□ -0.2
RAB40ALP0C0E4 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC13.79□□□□□ -0.2
RAB40ALP0C0E4 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC13.79□□□□□ -0.2
RAB40ALP0C0E4 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC13.79□□□□□ -0.2
RAB40ALP0C0E4 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC13.79□□□□□ -0.2
RAB40ALP0C0E4 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RAB40ALP0C0E4 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RAB40ALP0C0E4 AC242376.1-201ENST00000559033 726 ntBASIC13.79□□□□□ -0.2
RAB40ALP0C0E4 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC13.79□□□□□ -0.2
RAB40ALP0C0E4 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC13.79□□□□□ -0.2
RAB40ALP0C0E4 MIR4754-201ENST00000582477 89 ntBASIC13.79□□□□□ -0.2
RAB40ALP0C0E4 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC13.79□□□□□ -0.2
RAB40ALP0C0E4 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC13.79□□□□□ -0.2
RAB40ALP0C0E4 AL133499.1-201ENST00000596207 608 ntBASIC13.79□□□□□ -0.2
RAB40ALP0C0E4 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RAB40ALP0C0E4 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC13.79□□□□□ -0.2
RAB40ALP0C0E4 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
RAB40ALP0C0E4 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RAB40ALP0C0E4 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RAB40ALP0C0E4 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RAB40ALP0C0E4 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RAB40ALP0C0E4 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC13.79□□□□□ -0.2
RAB40ALP0C0E4 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RAB40ALP0C0E4 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
RAB40ALP0C0E4 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RAB40ALP0C0E4 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC13.79□□□□□ -0.2
RAB40ALP0C0E4 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC13.79□□□□□ -0.2
RAB40ALP0C0E4 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RAB40ALP0C0E4 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
RAB40ALP0C0E4 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RAB40ALP0C0E4 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
RAB40ALP0C0E4 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RAB40ALP0C0E4 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RAB40ALP0C0E4 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RAB40ALP0C0E4 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
RAB40ALP0C0E4 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RAB40ALP0C0E4 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
RAB40ALP0C0E4 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RAB40ALP0C0E4 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RAB40ALP0C0E4 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RAB40ALP0C0E4 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
RAB40ALP0C0E4 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RAB40ALP0C0E4 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
RAB40ALP0C0E4 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC13.79□□□□□ -0.2
RAB40ALP0C0E4 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
RAB40ALP0C0E4 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
RAB40ALP0C0E4 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
RAB40ALP0C0E4 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC13.78□□□□□ -0.2
RAB40ALP0C0E4 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
RAB40ALP0C0E4 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RAB40ALP0C0E4 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RAB40ALP0C0E4 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC13.78□□□□□ -0.2
RAB40ALP0C0E4 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC13.78□□□□□ -0.2
RAB40ALP0C0E4 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RAB40ALP0C0E4 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RAB40ALP0C0E4 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RAB40ALP0C0E4 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
RAB40ALP0C0E4 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RAB40ALP0C0E4 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RAB40ALP0C0E4 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 118 ms