Protein–RNA interactions for Protein: P04350

TUBB4A, Tubulin beta-4A chain, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4AP04350 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TUBB4AP04350 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TUBB4AP04350 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
TUBB4AP04350 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TUBB4AP04350 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TUBB4AP04350 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TUBB4AP04350 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TUBB4AP04350 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC15.72■□□□□ 0.11
TUBB4AP04350 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TUBB4AP04350 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC15.72■□□□□ 0.11
TUBB4AP04350 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC15.72■□□□□ 0.11
TUBB4AP04350 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TUBB4AP04350 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TUBB4AP04350 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC15.72■□□□□ 0.11
TUBB4AP04350 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC15.72■□□□□ 0.11
TUBB4AP04350 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC15.72■□□□□ 0.11
TUBB4AP04350 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TUBB4AP04350 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC15.72■□□□□ 0.11
TUBB4AP04350 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC15.72■□□□□ 0.11
TUBB4AP04350 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TUBB4AP04350 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TUBB4AP04350 AL138799.1-201ENST00000448213 1675 ntBASIC15.72■□□□□ 0.11
TUBB4AP04350 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
TUBB4AP04350 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
TUBB4AP04350 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TUBB4AP04350 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
TUBB4AP04350 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TUBB4AP04350 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TUBB4AP04350 LINC01165-201ENST00000445190 1623 ntBASIC15.72■□□□□ 0.11
TUBB4AP04350 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
TUBB4AP04350 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TUBB4AP04350 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
TUBB4AP04350 AL118506.1-201ENST00000601296 3082 ntBASIC15.71■□□□□ 0.11
TUBB4AP04350 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TUBB4AP04350 TRGV9-201ENST00000444775 1735 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
TUBB4AP04350 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TUBB4AP04350 PDE9A-202ENST00000328862 1956 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TUBB4AP04350 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TUBB4AP04350 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
TUBB4AP04350 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC15.71■□□□□ 0.11
TUBB4AP04350 EPN2-205ENST00000395626 2863 ntTSL 2 BASIC15.71■□□□□ 0.11
TUBB4AP04350 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TUBB4AP04350 AC026271.4-201ENST00000578214 1833 ntBASIC15.71■□□□□ 0.11
TUBB4AP04350 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
TUBB4AP04350 CETN4P-206ENST00000642099 2168 ntBASIC15.71■□□□□ 0.11
TUBB4AP04350 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
TUBB4AP04350 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
TUBB4AP04350 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC15.71■□□□□ 0.11
TUBB4AP04350 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TUBB4AP04350 AC023274.1-201ENST00000418278 595 ntBASIC15.71■□□□□ 0.11
TUBB4AP04350 AL080243.2-201ENST00000418783 582 ntBASIC15.71■□□□□ 0.11
TUBB4AP04350 UPF3AP3-201ENST00000420996 769 ntBASIC15.71■□□□□ 0.11
TUBB4AP04350 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
TUBB4AP04350 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC15.71■□□□□ 0.11
TUBB4AP04350 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
TUBB4AP04350 MTDHP5-201ENST00000598980 586 ntBASIC15.71■□□□□ 0.11
TUBB4AP04350 AL589739.1-201ENST00000607720 493 ntBASIC15.71■□□□□ 0.11
TUBB4AP04350 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC15.71■□□□□ 0.11
TUBB4AP04350 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
TUBB4AP04350 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TUBB4AP04350 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TUBB4AP04350 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC15.71■□□□□ 0.11
TUBB4AP04350 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TUBB4AP04350 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
TUBB4AP04350 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TUBB4AP04350 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TUBB4AP04350 USP3-204ENST00000540797 5474 ntTSL 2 BASIC15.71■□□□□ 0.11
TUBB4AP04350 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TUBB4AP04350 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC15.71■□□□□ 0.1
TUBB4AP04350 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
TUBB4AP04350 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TUBB4AP04350 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
TUBB4AP04350 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TUBB4AP04350 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
TUBB4AP04350 C17orf53-203ENST00000585683 2529 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
TUBB4AP04350 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TUBB4AP04350 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TUBB4AP04350 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
TUBB4AP04350 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
TUBB4AP04350 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TUBB4AP04350 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC15.7■□□□□ 0.1
TUBB4AP04350 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC15.7■□□□□ 0.1
TUBB4AP04350 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TUBB4AP04350 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TUBB4AP04350 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC15.7■□□□□ 0.1
TUBB4AP04350 GCOM1-214ENST00000587652 2329 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
TUBB4AP04350 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC15.7■□□□□ 0.1
TUBB4AP04350 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TUBB4AP04350 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC15.7■□□□□ 0.1
TUBB4AP04350 LSM5-207ENST00000410044 687 ntTSL 3 BASIC15.7■□□□□ 0.1
TUBB4AP04350 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TUBB4AP04350 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC15.7■□□□□ 0.1
TUBB4AP04350 AC022616.1-201ENST00000518688 554 ntBASIC15.7■□□□□ 0.1
TUBB4AP04350 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC15.7■□□□□ 0.1
TUBB4AP04350 AC010327.4-202ENST00000591484 748 ntBASIC15.7■□□□□ 0.1
TUBB4AP04350 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC15.7■□□□□ 0.1
TUBB4AP04350 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TUBB4AP04350 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
TUBB4AP04350 TTK-201ENST00000230510 3477 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
TUBB4AP04350 SECISBP2-202ENST00000375807 3462 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms