Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 CNTNAP3P2-201ENST00000617175 3861 ntBASIC15.46■□□□□ 0.07
RTN3O95197 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC15.46■□□□□ 0.07
RTN3O95197 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC15.46■□□□□ 0.07
RTN3O95197 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RTN3O95197 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RTN3O95197 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RTN3O95197 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC15.46■□□□□ 0.07
RTN3O95197 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RTN3O95197 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC15.46■□□□□ 0.07
RTN3O95197 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RTN3O95197 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RTN3O95197 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
RTN3O95197 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RTN3O95197 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC15.46■□□□□ 0.07
RTN3O95197 BCYRN1-201ENST00000418539 200 ntBASIC15.46■□□□□ 0.07
RTN3O95197 AC016700.1-201ENST00000429424 312 ntBASIC15.46■□□□□ 0.07
RTN3O95197 KLF2P1-201ENST00000447438 1042 ntBASIC15.46■□□□□ 0.07
RTN3O95197 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC15.46■□□□□ 0.07
RTN3O95197 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC15.46■□□□□ 0.07
RTN3O95197 OARD1-204ENST00000464633 717 ntTSL 2 BASIC15.46■□□□□ 0.07
RTN3O95197 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RTN3O95197 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC15.46■□□□□ 0.07
RTN3O95197 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC15.46■□□□□ 0.07
RTN3O95197 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC15.46■□□□□ 0.07
RTN3O95197 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC15.46■□□□□ 0.07
RTN3O95197 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
RTN3O95197 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC15.46■□□□□ 0.07
RTN3O95197 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC15.46■□□□□ 0.07
RTN3O95197 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC15.46■□□□□ 0.07
RTN3O95197 NDUFV2P1-201ENST00000596415 907 ntBASIC15.46■□□□□ 0.07
RTN3O95197 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
RTN3O95197 AC090164.2-201ENST00000611487 516 ntBASIC15.46■□□□□ 0.07
RTN3O95197 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC15.46■□□□□ 0.07
RTN3O95197 AC027601.5-201ENST00000624065 2482 ntBASIC15.46■□□□□ 0.07
RTN3O95197 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC15.46■□□□□ 0.07
RTN3O95197 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
RTN3O95197 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RTN3O95197 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
RTN3O95197 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
RTN3O95197 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RTN3O95197 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RTN3O95197 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC15.46■□□□□ 0.07
RTN3O95197 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
RTN3O95197 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RTN3O95197 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RTN3O95197 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
RTN3O95197 AC013726.1-201ENST00000563747 2285 ntBASIC15.46■□□□□ 0.06
RTN3O95197 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC15.46■□□□□ 0.06
RTN3O95197 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.06
RTN3O95197 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.06
RTN3O95197 CICP17-201ENST00000418553 2377 ntBASIC15.46■□□□□ 0.06
RTN3O95197 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
RTN3O95197 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
RTN3O95197 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
RTN3O95197 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
RTN3O95197 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
RTN3O95197 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RTN3O95197 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RTN3O95197 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
RTN3O95197 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
RTN3O95197 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RTN3O95197 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
RTN3O95197 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC15.45■□□□□ 0.06
RTN3O95197 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RTN3O95197 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
RTN3O95197 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
RTN3O95197 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
RTN3O95197 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
RTN3O95197 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC15.45■□□□□ 0.06
RTN3O95197 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RTN3O95197 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RTN3O95197 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RTN3O95197 NPPA-201ENST00000376476 728 ntTSL 3 BASIC15.45■□□□□ 0.06
RTN3O95197 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RTN3O95197 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RTN3O95197 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RTN3O95197 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RTN3O95197 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC15.45■□□□□ 0.06
RTN3O95197 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RTN3O95197 AC011742.3-201ENST00000439053 820 ntBASIC15.45■□□□□ 0.06
RTN3O95197 AC104073.2-201ENST00000453737 312 ntBASIC15.45■□□□□ 0.06
RTN3O95197 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC15.45■□□□□ 0.06
RTN3O95197 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC15.45■□□□□ 0.06
RTN3O95197 CSH2-206ENST00000560142 749 ntTSL 5 BASIC15.45■□□□□ 0.06
RTN3O95197 AC103988.2-201ENST00000561804 725 ntBASIC15.45■□□□□ 0.06
RTN3O95197 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC15.45■□□□□ 0.06
RTN3O95197 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RTN3O95197 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RTN3O95197 AC005962.1-201ENST00000584100 773 ntBASIC15.45■□□□□ 0.06
RTN3O95197 AC008805.1-201ENST00000590892 364 ntBASIC15.45■□□□□ 0.06
RTN3O95197 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
RTN3O95197 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
RTN3O95197 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RTN3O95197 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RTN3O95197 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC15.45■□□□□ 0.06
RTN3O95197 LINC00552-201ENST00000625151 2579 ntBASIC15.45■□□□□ 0.06
RTN3O95197 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC15.45■□□□□ 0.06
RTN3O95197 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RTN3O95197 AC232323.1-201ENST00000540724 2099 ntBASIC15.45■□□□□ 0.06
RTN3O95197 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms