Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 ABR-228ENST00000574437 3196 ntTSL 5 BASIC15.38■□□□□ 0.05
OPHN1O60890 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
OPHN1O60890 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
OPHN1O60890 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC15.38■□□□□ 0.05
OPHN1O60890 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
OPHN1O60890 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
OPHN1O60890 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
OPHN1O60890 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC15.38■□□□□ 0.05
OPHN1O60890 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC15.38■□□□□ 0.05
OPHN1O60890 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
OPHN1O60890 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC15.38■□□□□ 0.05
OPHN1O60890 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
OPHN1O60890 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
OPHN1O60890 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
OPHN1O60890 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC15.38■□□□□ 0.05
OPHN1O60890 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
OPHN1O60890 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
OPHN1O60890 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
OPHN1O60890 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC15.38■□□□□ 0.05
OPHN1O60890 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC15.38■□□□□ 0.05
OPHN1O60890 TPT1P11-201ENST00000458482 498 ntBASIC15.38■□□□□ 0.05
OPHN1O60890 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC15.38■□□□□ 0.05
OPHN1O60890 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
OPHN1O60890 FOS-206ENST00000555347 1280 ntTSL 2 BASIC15.38■□□□□ 0.05
OPHN1O60890 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC15.38■□□□□ 0.05
OPHN1O60890 GNRHR2-203ENST00000581100 1187 ntBASIC15.38■□□□□ 0.05
OPHN1O60890 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC15.38■□□□□ 0.05
OPHN1O60890 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC15.38■□□□□ 0.05
OPHN1O60890 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC15.38■□□□□ 0.05
OPHN1O60890 PRKN-211ENST00000615065 261 ntTSL 5 BASIC15.38■□□□□ 0.05
OPHN1O60890 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC15.38■□□□□ 0.05
OPHN1O60890 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
OPHN1O60890 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC15.38■□□□□ 0.05
OPHN1O60890 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
OPHN1O60890 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC15.38■□□□□ 0.05
OPHN1O60890 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC15.38■□□□□ 0.05
OPHN1O60890 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
OPHN1O60890 API5-203ENST00000455725 2257 ntTSL 2 BASIC15.38■□□□□ 0.05
OPHN1O60890 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC15.38■□□□□ 0.05
OPHN1O60890 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC15.38■□□□□ 0.05
OPHN1O60890 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
OPHN1O60890 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
OPHN1O60890 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
OPHN1O60890 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
OPHN1O60890 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
OPHN1O60890 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
OPHN1O60890 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
OPHN1O60890 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
OPHN1O60890 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
OPHN1O60890 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC15.37■□□□□ 0.05
OPHN1O60890 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
OPHN1O60890 TET3-201ENST00000305799 5174 ntTSL 5 BASIC15.37■□□□□ 0.05
OPHN1O60890 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
OPHN1O60890 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
OPHN1O60890 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
OPHN1O60890 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC15.37■□□□□ 0.05
OPHN1O60890 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC15.37■□□□□ 0.05
OPHN1O60890 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
OPHN1O60890 TNN-203ENST00000622870 3719 ntTSL 5 BASIC15.37■□□□□ 0.05
OPHN1O60890 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
OPHN1O60890 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
OPHN1O60890 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
OPHN1O60890 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
OPHN1O60890 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
OPHN1O60890 PGGT1BP2-201ENST00000398621 1028 ntBASIC15.37■□□□□ 0.05
OPHN1O60890 ACTBP8-201ENST00000403258 1108 ntBASIC15.37■□□□□ 0.05
OPHN1O60890 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC15.37■□□□□ 0.05
OPHN1O60890 EIF3FP3-201ENST00000434851 1086 ntBASIC15.37■□□□□ 0.05
OPHN1O60890 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC15.37■□□□□ 0.05
OPHN1O60890 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC15.37■□□□□ 0.05
OPHN1O60890 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC15.37■□□□□ 0.05
OPHN1O60890 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC15.37■□□□□ 0.05
OPHN1O60890 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC15.37■□□□□ 0.05
OPHN1O60890 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC15.37■□□□□ 0.05
OPHN1O60890 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC15.37■□□□□ 0.05
OPHN1O60890 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC15.37■□□□□ 0.05
OPHN1O60890 AL021578.1-201ENST00000613646 709 ntBASIC15.37■□□□□ 0.05
OPHN1O60890 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
OPHN1O60890 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
OPHN1O60890 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
OPHN1O60890 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC15.37■□□□□ 0.05
OPHN1O60890 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
OPHN1O60890 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
OPHN1O60890 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC15.37■□□□□ 0.05
OPHN1O60890 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
OPHN1O60890 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
OPHN1O60890 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
OPHN1O60890 GRN-222ENST00000639447 1314 ntTSL 2 BASIC15.37■□□□□ 0.05
OPHN1O60890 LRRC59-203ENST00000576448 1531 ntBASIC15.37■□□□□ 0.05
OPHN1O60890 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
OPHN1O60890 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
OPHN1O60890 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
OPHN1O60890 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC15.36■□□□□ 0.05
OPHN1O60890 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
OPHN1O60890 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
OPHN1O60890 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
OPHN1O60890 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
OPHN1O60890 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC15.36■□□□□ 0.05
OPHN1O60890 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
OPHN1O60890 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms