Protein–RNA interactions for Protein: O43924

PDE6D, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, humanhuman

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6DO43924 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
PDE6DO43924 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
PDE6DO43924 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
PDE6DO43924 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
PDE6DO43924 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC11.38□□□□□ -0.59
PDE6DO43924 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC11.38□□□□□ -0.59
PDE6DO43924 RPL13P2-201ENST00000440687 659 ntBASIC11.38□□□□□ -0.59
PDE6DO43924 HCG4P8-203ENST00000443049 980 ntBASIC11.38□□□□□ -0.59
PDE6DO43924 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC11.38□□□□□ -0.59
PDE6DO43924 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC11.38□□□□□ -0.59
PDE6DO43924 AC093909.1-201ENST00000504731 1122 ntBASIC11.38□□□□□ -0.59
PDE6DO43924 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC11.38□□□□□ -0.59
PDE6DO43924 AC243562.1-201ENST00000560672 389 ntBASIC11.38□□□□□ -0.59
PDE6DO43924 IGHV3OR16-6-201ENST00000568775 360 ntBASIC11.38□□□□□ -0.59
PDE6DO43924 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC11.38□□□□□ -0.59
PDE6DO43924 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
PDE6DO43924 AC000095.1-201ENST00000603208 874 ntBASIC11.38□□□□□ -0.59
PDE6DO43924 AL121912.1-201ENST00000603683 238 ntBASIC11.38□□□□□ -0.59
PDE6DO43924 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC11.38□□□□□ -0.59
PDE6DO43924 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC11.38□□□□□ -0.59
PDE6DO43924 AC055717.3-201ENST00000622967 595 ntBASIC11.38□□□□□ -0.59
PDE6DO43924 AC148477.8-201ENST00000624298 468 ntBASIC11.38□□□□□ -0.59
PDE6DO43924 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC11.38□□□□□ -0.59
PDE6DO43924 AC084121.4-201ENST00000641598 221 ntBASIC11.38□□□□□ -0.59
PDE6DO43924 AF228730.8-201ENST00000642140 221 ntBASIC11.38□□□□□ -0.59
PDE6DO43924 AL355102.3-201ENST00000554299 1678 ntBASIC11.38□□□□□ -0.59
PDE6DO43924 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC11.38□□□□□ -0.59
PDE6DO43924 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
PDE6DO43924 PER3-208ENST00000613533 6318 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
PDE6DO43924 DCDC2-202ENST00000378454 4707 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
PDE6DO43924 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC11.38□□□□□ -0.59
PDE6DO43924 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC11.38□□□□□ -0.59
PDE6DO43924 AL357143.1-202ENST00000640531 5777 ntTSL 5 BASIC11.38□□□□□ -0.59
PDE6DO43924 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
PDE6DO43924 UXT-AS1-201ENST00000590504 1525 ntBASIC11.38□□□□□ -0.59
PDE6DO43924 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC11.38□□□□□ -0.59
PDE6DO43924 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
PDE6DO43924 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC11.38□□□□□ -0.59
PDE6DO43924 ITSN1-208ENST00000399349 5191 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
PDE6DO43924 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
PDE6DO43924 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
PDE6DO43924 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
PDE6DO43924 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
PDE6DO43924 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC11.38□□□□□ -0.59
PDE6DO43924 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC11.38□□□□□ -0.59
PDE6DO43924 FAM189A2-204ENST00000455972 2107 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
PDE6DO43924 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC11.38□□□□□ -0.59
PDE6DO43924 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
PDE6DO43924 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC11.38□□□□□ -0.59
PDE6DO43924 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC11.38□□□□□ -0.59
PDE6DO43924 TFR2-205ENST00000462107 3131 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
PDE6DO43924 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
PDE6DO43924 C1orf167-202ENST00000433342 4545 ntAPPRIS P5 TSL 5 BASIC11.38□□□□□ -0.59
PDE6DO43924 RIPK4-201ENST00000332512 3889 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
PDE6DO43924 ZNF419-202ENST00000347466 3654 ntAPPRIS P3 TSL 2 BASIC11.37□□□□□ -0.59
PDE6DO43924 RERE-201ENST00000337907 8026 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
PDE6DO43924 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
PDE6DO43924 HPX-201ENST00000265983 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
PDE6DO43924 TMEM131L-203ENST00000409959 5017 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
PDE6DO43924 STXBP5L-201ENST00000273666 9496 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
PDE6DO43924 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
PDE6DO43924 DDX54-201ENST00000306014 4377 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
PDE6DO43924 HOXA7-201ENST00000242159 2018 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
PDE6DO43924 MYO16-205ENST00000457511 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
PDE6DO43924 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
PDE6DO43924 NBEA-204ENST00000400445 11119 ntAPPRIS P2 TSL 5 BASIC11.37□□□□□ -0.59
PDE6DO43924 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
PDE6DO43924 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
PDE6DO43924 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
PDE6DO43924 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC11.37□□□□□ -0.59
PDE6DO43924 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
PDE6DO43924 CSF3-203ENST00000394148 622 ntTSL 3 BASIC11.37□□□□□ -0.59
PDE6DO43924 TLE1P1-201ENST00000422965 589 ntBASIC11.37□□□□□ -0.59
PDE6DO43924 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
PDE6DO43924 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC11.37□□□□□ -0.59
PDE6DO43924 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC11.37□□□□□ -0.59
PDE6DO43924 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
PDE6DO43924 RNH1-224ENST00000534797 2973 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
PDE6DO43924 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC11.37□□□□□ -0.59
PDE6DO43924 BANF1P1-201ENST00000553684 263 ntBASIC11.37□□□□□ -0.59
PDE6DO43924 LITAF-210ENST00000571976 548 ntTSL 2 BASIC11.37□□□□□ -0.59
PDE6DO43924 LITAF-214ENST00000574703 486 ntTSL 2 BASIC11.37□□□□□ -0.59
PDE6DO43924 RMI2-205ENST00000576027 818 ntTSL 2 BASIC11.37□□□□□ -0.59
PDE6DO43924 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
PDE6DO43924 AC064836.3-201ENST00000607928 673 ntBASIC11.37□□□□□ -0.59
PDE6DO43924 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC11.37□□□□□ -0.59
PDE6DO43924 AC066615.1-201ENST00000640911 628 ntBASIC11.37□□□□□ -0.59
PDE6DO43924 BAK1-203ENST00000442998 2212 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
PDE6DO43924 AC107375.1-201ENST00000564464 2231 ntBASIC11.37□□□□□ -0.59
PDE6DO43924 WNT5A-201ENST00000264634 6176 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
PDE6DO43924 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
PDE6DO43924 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC11.37□□□□□ -0.59
PDE6DO43924 NRDC-202ENST00000354831 3895 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
PDE6DO43924 AL121827.1-201ENST00000370257 3264 ntTSL 2 BASIC11.37□□□□□ -0.59
PDE6DO43924 KIAA0513-201ENST00000258180 7404 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
PDE6DO43924 COX6B2-210ENST00000593184 2083 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
PDE6DO43924 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
PDE6DO43924 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC11.37□□□□□ -0.59
PDE6DO43924 AC010970.1-201ENST00000445125 1848 ntBASIC11.37□□□□□ -0.59
PDE6DO43924 AKAP13-201ENST00000361243 9468 ntAPPRIS P4 TSL 1 (best) BASIC11.37□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms