Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRAF3IP2O43734 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRAF3IP2O43734 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC13.05□□□□□ -0.32
TRAF3IP2O43734 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRAF3IP2O43734 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TRAF3IP2O43734 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRAF3IP2O43734 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRAF3IP2O43734 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRAF3IP2O43734 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TRAF3IP2O43734 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
TRAF3IP2O43734 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
TRAF3IP2O43734 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRAF3IP2O43734 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC13.04□□□□□ -0.32
TRAF3IP2O43734 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC13.04□□□□□ -0.32
TRAF3IP2O43734 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TRAF3IP2O43734 ABR-228ENST00000574437 3196 ntTSL 5 BASIC13.04□□□□□ -0.32
TRAF3IP2O43734 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TRAF3IP2O43734 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRAF3IP2O43734 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC13.04□□□□□ -0.32
TRAF3IP2O43734 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC13.04□□□□□ -0.32
TRAF3IP2O43734 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC13.04□□□□□ -0.32
TRAF3IP2O43734 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC13.04□□□□□ -0.32
TRAF3IP2O43734 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC13.04□□□□□ -0.32
TRAF3IP2O43734 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC13.04□□□□□ -0.32
TRAF3IP2O43734 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRAF3IP2O43734 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRAF3IP2O43734 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRAF3IP2O43734 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TRAF3IP2O43734 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC13.04□□□□□ -0.32
TRAF3IP2O43734 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
TRAF3IP2O43734 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
TRAF3IP2O43734 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC13.04□□□□□ -0.32
TRAF3IP2O43734 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC13.04□□□□□ -0.32
TRAF3IP2O43734 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC13.04□□□□□ -0.32
TRAF3IP2O43734 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC13.04□□□□□ -0.32
TRAF3IP2O43734 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TRAF3IP2O43734 RNF41-210ENST00000552244 716 ntTSL 3 BASIC13.04□□□□□ -0.32
TRAF3IP2O43734 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRAF3IP2O43734 AC244157.2-201ENST00000616239 1006 ntBASIC13.04□□□□□ -0.32
TRAF3IP2O43734 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC13.04□□□□□ -0.32
TRAF3IP2O43734 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC13.04□□□□□ -0.32
TRAF3IP2O43734 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRAF3IP2O43734 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC13.04□□□□□ -0.32
TRAF3IP2O43734 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC13.04□□□□□ -0.32
TRAF3IP2O43734 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRAF3IP2O43734 OS9-204ENST00000389146 2091 ntTSL 2 BASIC13.04□□□□□ -0.32
TRAF3IP2O43734 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRAF3IP2O43734 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TRAF3IP2O43734 HPD-204ENST00000543163 1709 ntTSL 5 BASIC13.04□□□□□ -0.32
TRAF3IP2O43734 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRAF3IP2O43734 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
TRAF3IP2O43734 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRAF3IP2O43734 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRAF3IP2O43734 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRAF3IP2O43734 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRAF3IP2O43734 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRAF3IP2O43734 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
TRAF3IP2O43734 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TRAF3IP2O43734 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRAF3IP2O43734 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRAF3IP2O43734 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC13.03□□□□□ -0.32
TRAF3IP2O43734 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TRAF3IP2O43734 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
TRAF3IP2O43734 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRAF3IP2O43734 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRAF3IP2O43734 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRAF3IP2O43734 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TRAF3IP2O43734 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRAF3IP2O43734 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRAF3IP2O43734 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRAF3IP2O43734 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC13.03□□□□□ -0.32
TRAF3IP2O43734 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRAF3IP2O43734 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
TRAF3IP2O43734 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRAF3IP2O43734 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC13.03□□□□□ -0.32
TRAF3IP2O43734 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TRAF3IP2O43734 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TRAF3IP2O43734 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TRAF3IP2O43734 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TRAF3IP2O43734 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
TRAF3IP2O43734 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC13.03□□□□□ -0.32
TRAF3IP2O43734 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC13.03□□□□□ -0.32
TRAF3IP2O43734 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRAF3IP2O43734 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC13.03□□□□□ -0.32
TRAF3IP2O43734 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TRAF3IP2O43734 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC13.03□□□□□ -0.32
TRAF3IP2O43734 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
TRAF3IP2O43734 AL645933.1-201ENST00000440087 609 ntBASIC13.03□□□□□ -0.32
TRAF3IP2O43734 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TRAF3IP2O43734 IGHVIII-5-2-201ENST00000522505 261 ntBASIC13.03□□□□□ -0.32
TRAF3IP2O43734 ACR-203ENST00000529621 708 ntTSL 5 BASIC13.03□□□□□ -0.32
TRAF3IP2O43734 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC13.03□□□□□ -0.32
TRAF3IP2O43734 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC13.03□□□□□ -0.32
TRAF3IP2O43734 IFT20-216ENST00000588477 774 ntTSL 5 BASIC13.03□□□□□ -0.32
TRAF3IP2O43734 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC13.03□□□□□ -0.32
TRAF3IP2O43734 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
TRAF3IP2O43734 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
TRAF3IP2O43734 AC064801.2-201ENST00000625052 1303 ntBASIC13.03□□□□□ -0.32
TRAF3IP2O43734 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRAF3IP2O43734 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms