Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
XRCC2O43543 F10-203ENST00000409306 1450 ntTSL 3 BASIC12.78□□□□□ -0.36
XRCC2O43543 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
XRCC2O43543 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
XRCC2O43543 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
XRCC2O43543 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
XRCC2O43543 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
XRCC2O43543 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
XRCC2O43543 AL354989.2-201ENST00000435838 1540 ntBASIC12.78□□□□□ -0.36
XRCC2O43543 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC12.78□□□□□ -0.36
XRCC2O43543 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
XRCC2O43543 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
XRCC2O43543 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC12.78□□□□□ -0.36
XRCC2O43543 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
XRCC2O43543 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
XRCC2O43543 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC12.78□□□□□ -0.36
XRCC2O43543 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
XRCC2O43543 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
XRCC2O43543 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
XRCC2O43543 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
XRCC2O43543 EDF1-203ENST00000371649 790 ntTSL 2 BASIC12.78□□□□□ -0.36
XRCC2O43543 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
XRCC2O43543 FTH1P14-201ENST00000482930 551 ntBASIC12.78□□□□□ -0.36
XRCC2O43543 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC12.78□□□□□ -0.36
XRCC2O43543 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC12.78□□□□□ -0.36
XRCC2O43543 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC12.78□□□□□ -0.36
XRCC2O43543 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
XRCC2O43543 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC12.78□□□□□ -0.36
XRCC2O43543 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC12.78□□□□□ -0.36
XRCC2O43543 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC12.78□□□□□ -0.36
XRCC2O43543 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
XRCC2O43543 OR10B1P-201ENST00000601666 907 ntBASIC12.78□□□□□ -0.36
XRCC2O43543 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC12.78□□□□□ -0.36
XRCC2O43543 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC12.78□□□□□ -0.36
XRCC2O43543 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
XRCC2O43543 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
XRCC2O43543 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC12.78□□□□□ -0.36
XRCC2O43543 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC12.78□□□□□ -0.36
XRCC2O43543 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
XRCC2O43543 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
XRCC2O43543 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC12.78□□□□□ -0.36
XRCC2O43543 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC12.78□□□□□ -0.36
XRCC2O43543 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
XRCC2O43543 AC136759.1-202ENST00000530858 2194 ntBASIC12.78□□□□□ -0.36
XRCC2O43543 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
XRCC2O43543 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC12.78□□□□□ -0.36
XRCC2O43543 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC12.78□□□□□ -0.36
XRCC2O43543 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
XRCC2O43543 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
XRCC2O43543 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
XRCC2O43543 INE2-201ENST00000630399 1874 ntBASIC12.78□□□□□ -0.36
XRCC2O43543 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
XRCC2O43543 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC12.78□□□□□ -0.36
XRCC2O43543 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
XRCC2O43543 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
XRCC2O43543 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
XRCC2O43543 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
XRCC2O43543 C8orf49-201ENST00000525043 1968 ntBASIC12.78□□□□□ -0.36
XRCC2O43543 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
XRCC2O43543 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
XRCC2O43543 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC12.78□□□□□ -0.36
XRCC2O43543 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
XRCC2O43543 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC12.77□□□□□ -0.36
XRCC2O43543 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
XRCC2O43543 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC12.77□□□□□ -0.36
XRCC2O43543 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
XRCC2O43543 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
XRCC2O43543 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
XRCC2O43543 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
XRCC2O43543 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
XRCC2O43543 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
XRCC2O43543 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
XRCC2O43543 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
XRCC2O43543 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
XRCC2O43543 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
XRCC2O43543 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
XRCC2O43543 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
XRCC2O43543 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
XRCC2O43543 KHSRPP1-201ENST00000427983 1768 ntBASIC12.77□□□□□ -0.36
XRCC2O43543 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.36
XRCC2O43543 RN7SL832P-201ENST00000607781 1756 ntBASIC12.77□□□□□ -0.36
XRCC2O43543 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.36
XRCC2O43543 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
XRCC2O43543 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
XRCC2O43543 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC12.77□□□□□ -0.37
XRCC2O43543 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC12.77□□□□□ -0.37
XRCC2O43543 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
XRCC2O43543 WARS-203ENST00000358655 2466 ntTSL 2 BASIC12.77□□□□□ -0.37
XRCC2O43543 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
XRCC2O43543 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
XRCC2O43543 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
XRCC2O43543 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
XRCC2O43543 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
XRCC2O43543 AC004945.1-201ENST00000416738 983 ntBASIC12.77□□□□□ -0.37
XRCC2O43543 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
XRCC2O43543 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
XRCC2O43543 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC12.77□□□□□ -0.37
XRCC2O43543 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC12.77□□□□□ -0.37
XRCC2O43543 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
XRCC2O43543 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC12.77□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms