Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RIPK2O43353 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
RIPK2O43353 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC14.89□□□□□ -0.03
RIPK2O43353 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
RIPK2O43353 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RIPK2O43353 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RIPK2O43353 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RIPK2O43353 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
RIPK2O43353 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RIPK2O43353 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RIPK2O43353 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RIPK2O43353 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
RIPK2O43353 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
RIPK2O43353 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC14.88□□□□□ -0.03
RIPK2O43353 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RIPK2O43353 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RIPK2O43353 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RIPK2O43353 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RIPK2O43353 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC14.88□□□□□ -0.03
RIPK2O43353 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
RIPK2O43353 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
RIPK2O43353 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RIPK2O43353 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RIPK2O43353 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
RIPK2O43353 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC14.88□□□□□ -0.03
RIPK2O43353 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC14.88□□□□□ -0.03
RIPK2O43353 C1QBPP1-201ENST00000400117 770 ntBASIC14.88□□□□□ -0.03
RIPK2O43353 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC14.88□□□□□ -0.03
RIPK2O43353 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC14.88□□□□□ -0.03
RIPK2O43353 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC14.88□□□□□ -0.03
RIPK2O43353 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC14.88□□□□□ -0.03
RIPK2O43353 AC025678.2-201ENST00000562061 970 ntBASIC14.88□□□□□ -0.03
RIPK2O43353 AC104794.3-201ENST00000566840 1248 ntBASIC14.88□□□□□ -0.03
RIPK2O43353 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC14.88□□□□□ -0.03
RIPK2O43353 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC14.88□□□□□ -0.03
RIPK2O43353 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC14.88□□□□□ -0.03
RIPK2O43353 KLK3-207ENST00000595952 969 ntTSL 3 BASIC14.88□□□□□ -0.03
RIPK2O43353 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC14.88□□□□□ -0.03
RIPK2O43353 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
RIPK2O43353 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RIPK2O43353 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RIPK2O43353 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RIPK2O43353 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RIPK2O43353 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RIPK2O43353 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
RIPK2O43353 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC14.88□□□□□ -0.03
RIPK2O43353 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RIPK2O43353 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC14.88□□□□□ -0.03
RIPK2O43353 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC14.88□□□□□ -0.03
RIPK2O43353 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RIPK2O43353 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC14.88□□□□□ -0.03
RIPK2O43353 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
RIPK2O43353 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC14.88□□□□□ -0.03
RIPK2O43353 F10-203ENST00000409306 1450 ntTSL 3 BASIC14.88□□□□□ -0.03
RIPK2O43353 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC14.88□□□□□ -0.03
RIPK2O43353 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
RIPK2O43353 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RIPK2O43353 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RIPK2O43353 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
RIPK2O43353 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RIPK2O43353 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC14.87□□□□□ -0.03
RIPK2O43353 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
RIPK2O43353 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RIPK2O43353 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC14.87□□□□□ -0.03
RIPK2O43353 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
RIPK2O43353 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
RIPK2O43353 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RIPK2O43353 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
RIPK2O43353 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RIPK2O43353 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC14.87□□□□□ -0.03
RIPK2O43353 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
RIPK2O43353 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RIPK2O43353 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC14.87□□□□□ -0.03
RIPK2O43353 ACTBP8-201ENST00000403258 1108 ntBASIC14.87□□□□□ -0.03
RIPK2O43353 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC14.87□□□□□ -0.03
RIPK2O43353 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC14.87□□□□□ -0.03
RIPK2O43353 TPRX2P-201ENST00000535362 881 ntBASIC14.87□□□□□ -0.03
RIPK2O43353 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC14.87□□□□□ -0.03
RIPK2O43353 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
RIPK2O43353 AC124283.3-201ENST00000570869 594 ntBASIC14.87□□□□□ -0.03
RIPK2O43353 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC14.87□□□□□ -0.03
RIPK2O43353 BX088702.1-201ENST00000610784 235 ntBASIC14.87□□□□□ -0.03
RIPK2O43353 BAP1-211ENST00000615113 489 ntBASIC14.87□□□□□ -0.03
RIPK2O43353 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RIPK2O43353 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RIPK2O43353 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
RIPK2O43353 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RIPK2O43353 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RIPK2O43353 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
RIPK2O43353 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RIPK2O43353 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RIPK2O43353 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RIPK2O43353 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RIPK2O43353 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RIPK2O43353 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC14.87□□□□□ -0.03
RIPK2O43353 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC14.87□□□□□ -0.03
RIPK2O43353 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC14.87□□□□□ -0.03
RIPK2O43353 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RIPK2O43353 AL928654.5-201ENST00000624831 2501 ntBASIC14.87□□□□□ -0.03
RIPK2O43353 AP002761.4-201ENST00000565433 3361 ntBASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms