Protein–RNA interactions for Protein: F8W1W9

NPIPB9, Nuclear pore complex-interacting protein family member B9, humanhuman

Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB9F8W1W9 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
NPIPB9F8W1W9 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
NPIPB9F8W1W9 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC13.33□□□□□ -0.28
NPIPB9F8W1W9 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC13.33□□□□□ -0.28
NPIPB9F8W1W9 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
NPIPB9F8W1W9 MTX1P1-201ENST00000440904 838 ntBASIC13.33□□□□□ -0.28
NPIPB9F8W1W9 GOLGA2P4-201ENST00000441462 777 ntBASIC13.33□□□□□ -0.28
NPIPB9F8W1W9 ATP5G2P4-201ENST00000442175 420 ntBASIC13.33□□□□□ -0.28
NPIPB9F8W1W9 Z93015.1-201ENST00000451718 390 ntBASIC13.33□□□□□ -0.28
NPIPB9F8W1W9 TMEM198B-204ENST00000484016 896 ntBASIC13.33□□□□□ -0.28
NPIPB9F8W1W9 AC006122.1-201ENST00000493323 440 ntBASIC13.33□□□□□ -0.28
NPIPB9F8W1W9 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
NPIPB9F8W1W9 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
NPIPB9F8W1W9 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC13.33□□□□□ -0.28
NPIPB9F8W1W9 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC13.33□□□□□ -0.28
NPIPB9F8W1W9 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NPIPB9F8W1W9 USB1-203ENST00000539737 1212 ntTSL 2 BASIC13.33□□□□□ -0.28
NPIPB9F8W1W9 NOP2-220ENST00000545915 630 ntTSL 2 BASIC13.33□□□□□ -0.28
NPIPB9F8W1W9 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
NPIPB9F8W1W9 AL583810.1-201ENST00000553344 1045 ntBASIC13.33□□□□□ -0.28
NPIPB9F8W1W9 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC13.33□□□□□ -0.28
NPIPB9F8W1W9 AC005324.6-201ENST00000587972 613 ntBASIC13.33□□□□□ -0.28
NPIPB9F8W1W9 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC13.33□□□□□ -0.28
NPIPB9F8W1W9 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC13.33□□□□□ -0.28
NPIPB9F8W1W9 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
NPIPB9F8W1W9 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NPIPB9F8W1W9 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC13.33□□□□□ -0.28
NPIPB9F8W1W9 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NPIPB9F8W1W9 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC13.33□□□□□ -0.28
NPIPB9F8W1W9 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
NPIPB9F8W1W9 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC13.33□□□□□ -0.28
NPIPB9F8W1W9 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NPIPB9F8W1W9 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NPIPB9F8W1W9 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
NPIPB9F8W1W9 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NPIPB9F8W1W9 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
NPIPB9F8W1W9 AL359881.3-201ENST00000602640 1721 ntBASIC13.33□□□□□ -0.28
NPIPB9F8W1W9 BEND3P1-201ENST00000421591 1944 ntBASIC13.33□□□□□ -0.28
NPIPB9F8W1W9 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.28
NPIPB9F8W1W9 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
NPIPB9F8W1W9 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
NPIPB9F8W1W9 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC13.32□□□□□ -0.28
NPIPB9F8W1W9 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NPIPB9F8W1W9 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NPIPB9F8W1W9 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC13.32□□□□□ -0.28
NPIPB9F8W1W9 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
NPIPB9F8W1W9 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
NPIPB9F8W1W9 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
NPIPB9F8W1W9 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
NPIPB9F8W1W9 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
NPIPB9F8W1W9 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
NPIPB9F8W1W9 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC13.32□□□□□ -0.28
NPIPB9F8W1W9 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
NPIPB9F8W1W9 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NPIPB9F8W1W9 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
NPIPB9F8W1W9 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC13.32□□□□□ -0.28
NPIPB9F8W1W9 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
NPIPB9F8W1W9 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
NPIPB9F8W1W9 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NPIPB9F8W1W9 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NPIPB9F8W1W9 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
NPIPB9F8W1W9 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
NPIPB9F8W1W9 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC13.32□□□□□ -0.28
NPIPB9F8W1W9 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC13.32□□□□□ -0.28
NPIPB9F8W1W9 NDUFAB1P1-201ENST00000404262 460 ntBASIC13.32□□□□□ -0.28
NPIPB9F8W1W9 MIR663B-201ENST00000408361 115 ntBASIC13.32□□□□□ -0.28
NPIPB9F8W1W9 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
NPIPB9F8W1W9 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC13.32□□□□□ -0.28
NPIPB9F8W1W9 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC13.32□□□□□ -0.28
NPIPB9F8W1W9 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC13.32□□□□□ -0.28
NPIPB9F8W1W9 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC13.32□□□□□ -0.28
NPIPB9F8W1W9 AC005730.2-201ENST00000564549 1184 ntBASIC13.32□□□□□ -0.28
NPIPB9F8W1W9 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
NPIPB9F8W1W9 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC13.32□□□□□ -0.28
NPIPB9F8W1W9 RN7SL560P-201ENST00000577943 264 ntBASIC13.32□□□□□ -0.28
NPIPB9F8W1W9 AC005962.1-201ENST00000584100 773 ntBASIC13.32□□□□□ -0.28
NPIPB9F8W1W9 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC13.32□□□□□ -0.28
NPIPB9F8W1W9 KLK3-211ENST00000597483 810 ntTSL 2 BASIC13.32□□□□□ -0.28
NPIPB9F8W1W9 AC239800.4-201ENST00000603712 296 ntBASIC13.32□□□□□ -0.28
NPIPB9F8W1W9 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC13.32□□□□□ -0.28
NPIPB9F8W1W9 AP000346.4-201ENST00000614827 381 ntBASIC13.32□□□□□ -0.28
NPIPB9F8W1W9 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC13.32□□□□□ -0.28
NPIPB9F8W1W9 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NPIPB9F8W1W9 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NPIPB9F8W1W9 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
NPIPB9F8W1W9 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
NPIPB9F8W1W9 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
NPIPB9F8W1W9 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NPIPB9F8W1W9 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NPIPB9F8W1W9 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC13.32□□□□□ -0.28
NPIPB9F8W1W9 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC13.32□□□□□ -0.28
NPIPB9F8W1W9 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
NPIPB9F8W1W9 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NPIPB9F8W1W9 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
NPIPB9F8W1W9 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC13.32□□□□□ -0.28
NPIPB9F8W1W9 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
NPIPB9F8W1W9 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
NPIPB9F8W1W9 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
NPIPB9F8W1W9 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC13.32□□□□□ -0.28
NPIPB9F8W1W9 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms