Protein–RNA interactions for Protein: A6NDR6

MEIS3P1, Putative homeobox protein Meis3-like 1, humanhuman

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3P1A6NDR6 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
MEIS3P1A6NDR6 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC12.62□□□□□ -0.39
MEIS3P1A6NDR6 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
MEIS3P1A6NDR6 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
MEIS3P1A6NDR6 AC015688.4-201ENST00000580780 1647 ntBASIC12.62□□□□□ -0.39
MEIS3P1A6NDR6 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC12.62□□□□□ -0.39
MEIS3P1A6NDR6 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC12.62□□□□□ -0.39
MEIS3P1A6NDR6 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
MEIS3P1A6NDR6 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
MEIS3P1A6NDR6 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
MEIS3P1A6NDR6 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC12.62□□□□□ -0.39
MEIS3P1A6NDR6 HNRNPDL-207ENST00000614627 3968 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
MEIS3P1A6NDR6 PIK3R1-213ENST00000521657 3891 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
MEIS3P1A6NDR6 RIMS1-218ENST00000522291 3876 ntTSL 5 BASIC12.62□□□□□ -0.39
MEIS3P1A6NDR6 CACNA1G-226ENST00000513689 6879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
MEIS3P1A6NDR6 CACNA1G-228ENST00000514079 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
MEIS3P1A6NDR6 CACNA1G-231ENST00000515165 6870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
MEIS3P1A6NDR6 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
MEIS3P1A6NDR6 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC12.61□□□□□ -0.39
MEIS3P1A6NDR6 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
MEIS3P1A6NDR6 CYB5A-202ENST00000340533 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
MEIS3P1A6NDR6 PCDHA6-201ENST00000378126 3267 ntBASIC12.61□□□□□ -0.39
MEIS3P1A6NDR6 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
MEIS3P1A6NDR6 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
MEIS3P1A6NDR6 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
MEIS3P1A6NDR6 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
MEIS3P1A6NDR6 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
MEIS3P1A6NDR6 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
MEIS3P1A6NDR6 TMEM131L-202ENST00000409663 5017 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
MEIS3P1A6NDR6 STRIP2-202ENST00000435494 2866 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
MEIS3P1A6NDR6 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
MEIS3P1A6NDR6 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC12.61□□□□□ -0.39
MEIS3P1A6NDR6 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC12.61□□□□□ -0.39
MEIS3P1A6NDR6 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC12.61□□□□□ -0.39
MEIS3P1A6NDR6 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
MEIS3P1A6NDR6 NPAS4-201ENST00000311034 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
MEIS3P1A6NDR6 PSD-202ENST00000406432 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
MEIS3P1A6NDR6 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
MEIS3P1A6NDR6 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
MEIS3P1A6NDR6 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
MEIS3P1A6NDR6 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
MEIS3P1A6NDR6 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC12.61□□□□□ -0.39
MEIS3P1A6NDR6 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
MEIS3P1A6NDR6 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
MEIS3P1A6NDR6 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
MEIS3P1A6NDR6 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
MEIS3P1A6NDR6 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
MEIS3P1A6NDR6 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC12.61□□□□□ -0.39
MEIS3P1A6NDR6 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
MEIS3P1A6NDR6 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
MEIS3P1A6NDR6 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC12.61□□□□□ -0.39
MEIS3P1A6NDR6 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC12.61□□□□□ -0.39
MEIS3P1A6NDR6 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC12.61□□□□□ -0.39
MEIS3P1A6NDR6 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC12.61□□□□□ -0.39
MEIS3P1A6NDR6 POLD2P1-201ENST00000511220 997 ntBASIC12.61□□□□□ -0.39
MEIS3P1A6NDR6 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
MEIS3P1A6NDR6 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC12.61□□□□□ -0.39
MEIS3P1A6NDR6 CCND1-203ENST00000536559 553 ntTSL 3 BASIC12.61□□□□□ -0.39
MEIS3P1A6NDR6 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC12.61□□□□□ -0.39
MEIS3P1A6NDR6 TEX28P1-201ENST00000613479 1221 ntBASIC12.61□□□□□ -0.39
MEIS3P1A6NDR6 TEX28P2-201ENST00000617764 1221 ntBASIC12.61□□□□□ -0.39
MEIS3P1A6NDR6 SPDYE12P-201ENST00000618416 771 ntBASIC12.61□□□□□ -0.39
MEIS3P1A6NDR6 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
MEIS3P1A6NDR6 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC12.61□□□□□ -0.39
MEIS3P1A6NDR6 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
MEIS3P1A6NDR6 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC12.61□□□□□ -0.39
MEIS3P1A6NDR6 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
MEIS3P1A6NDR6 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
MEIS3P1A6NDR6 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
MEIS3P1A6NDR6 TOLLIP-203ENST00000525159 3429 ntTSL 2 BASIC12.61□□□□□ -0.39
MEIS3P1A6NDR6 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
MEIS3P1A6NDR6 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
MEIS3P1A6NDR6 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
MEIS3P1A6NDR6 BRAP-202ENST00000419234 4026 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
MEIS3P1A6NDR6 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
MEIS3P1A6NDR6 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC12.61□□□□□ -0.39
MEIS3P1A6NDR6 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
MEIS3P1A6NDR6 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
MEIS3P1A6NDR6 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
MEIS3P1A6NDR6 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
MEIS3P1A6NDR6 SALL4P5-201ENST00000419001 1760 ntBASIC12.61□□□□□ -0.39
MEIS3P1A6NDR6 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
MEIS3P1A6NDR6 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC12.61□□□□□ -0.39
MEIS3P1A6NDR6 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
MEIS3P1A6NDR6 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
MEIS3P1A6NDR6 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
MEIS3P1A6NDR6 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC12.61□□□□□ -0.39
MEIS3P1A6NDR6 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
MEIS3P1A6NDR6 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
MEIS3P1A6NDR6 TMEM248-201ENST00000341567 4229 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
MEIS3P1A6NDR6 NEK9-201ENST00000238616 8310 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
MEIS3P1A6NDR6 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC12.6□□□□□ -0.39
MEIS3P1A6NDR6 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
MEIS3P1A6NDR6 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
MEIS3P1A6NDR6 HAL-202ENST00000538703 2637 ntTSL 2 BASIC12.6□□□□□ -0.39
MEIS3P1A6NDR6 TP53INP2-202ENST00000374810 4184 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
MEIS3P1A6NDR6 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
MEIS3P1A6NDR6 GAS6-AS1-201ENST00000458001 7169 ntTSL 5 BASIC12.6□□□□□ -0.39
MEIS3P1A6NDR6 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
MEIS3P1A6NDR6 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms