Protein–RNA interactions for Protein: A0A1W2PPF3

DUXB, Double homeobox B, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUXBA0A1W2PPF3 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
DUXBA0A1W2PPF3 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC11.98□□□□□ -0.49
DUXBA0A1W2PPF3 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
DUXBA0A1W2PPF3 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
DUXBA0A1W2PPF3 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
DUXBA0A1W2PPF3 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
DUXBA0A1W2PPF3 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC11.98□□□□□ -0.49
DUXBA0A1W2PPF3 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
DUXBA0A1W2PPF3 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
DUXBA0A1W2PPF3 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
DUXBA0A1W2PPF3 DNAJC13-201ENST00000260818 7730 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
DUXBA0A1W2PPF3 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC11.98□□□□□ -0.49
DUXBA0A1W2PPF3 STRCP1-201ENST00000509801 5328 ntBASIC11.98□□□□□ -0.49
DUXBA0A1W2PPF3 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
DUXBA0A1W2PPF3 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC11.98□□□□□ -0.49
DUXBA0A1W2PPF3 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC11.98□□□□□ -0.49
DUXBA0A1W2PPF3 AC024075.2-201ENST00000598112 1473 ntBASIC11.98□□□□□ -0.49
DUXBA0A1W2PPF3 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
DUXBA0A1W2PPF3 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
DUXBA0A1W2PPF3 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
DUXBA0A1W2PPF3 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC11.98□□□□□ -0.49
DUXBA0A1W2PPF3 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
DUXBA0A1W2PPF3 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC11.98□□□□□ -0.49
DUXBA0A1W2PPF3 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
DUXBA0A1W2PPF3 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC11.98□□□□□ -0.49
DUXBA0A1W2PPF3 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
DUXBA0A1W2PPF3 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
DUXBA0A1W2PPF3 KRT18P13-201ENST00000400056 1290 ntBASIC11.98□□□□□ -0.49
DUXBA0A1W2PPF3 COA5-202ENST00000409997 557 ntTSL 4 BASIC11.98□□□□□ -0.49
DUXBA0A1W2PPF3 AC136604.1-202ENST00000425471 771 ntBASIC11.98□□□□□ -0.49
DUXBA0A1W2PPF3 CNN2P2-201ENST00000443536 909 ntBASIC11.98□□□□□ -0.49
DUXBA0A1W2PPF3 CNN2P3-201ENST00000450201 906 ntBASIC11.98□□□□□ -0.49
DUXBA0A1W2PPF3 VDAC1P7-201ENST00000462417 847 ntBASIC11.98□□□□□ -0.49
DUXBA0A1W2PPF3 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
DUXBA0A1W2PPF3 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC11.98□□□□□ -0.49
DUXBA0A1W2PPF3 RAB35-202ENST00000534951 939 ntTSL 2 BASIC11.98□□□□□ -0.49
DUXBA0A1W2PPF3 RARRES2P5-201ENST00000564013 466 ntBASIC11.98□□□□□ -0.49
DUXBA0A1W2PPF3 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC11.98□□□□□ -0.49
DUXBA0A1W2PPF3 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC11.98□□□□□ -0.49
DUXBA0A1W2PPF3 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC11.98□□□□□ -0.49
DUXBA0A1W2PPF3 AL136317.3-201ENST00000618497 906 ntBASIC11.98□□□□□ -0.49
DUXBA0A1W2PPF3 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC11.98□□□□□ -0.49
DUXBA0A1W2PPF3 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
DUXBA0A1W2PPF3 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
DUXBA0A1W2PPF3 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
DUXBA0A1W2PPF3 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
DUXBA0A1W2PPF3 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
DUXBA0A1W2PPF3 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC11.98□□□□□ -0.49
DUXBA0A1W2PPF3 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC11.98□□□□□ -0.49
DUXBA0A1W2PPF3 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
DUXBA0A1W2PPF3 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
DUXBA0A1W2PPF3 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
DUXBA0A1W2PPF3 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
DUXBA0A1W2PPF3 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
DUXBA0A1W2PPF3 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
DUXBA0A1W2PPF3 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
DUXBA0A1W2PPF3 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
DUXBA0A1W2PPF3 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
DUXBA0A1W2PPF3 OS9-218ENST00000551035 2246 ntTSL 2 BASIC11.98□□□□□ -0.49
DUXBA0A1W2PPF3 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC11.98□□□□□ -0.49
DUXBA0A1W2PPF3 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC11.98□□□□□ -0.49
DUXBA0A1W2PPF3 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC11.98□□□□□ -0.49
DUXBA0A1W2PPF3 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
DUXBA0A1W2PPF3 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
DUXBA0A1W2PPF3 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
DUXBA0A1W2PPF3 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
DUXBA0A1W2PPF3 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
DUXBA0A1W2PPF3 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
DUXBA0A1W2PPF3 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
DUXBA0A1W2PPF3 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC11.97□□□□□ -0.49
DUXBA0A1W2PPF3 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
DUXBA0A1W2PPF3 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
DUXBA0A1W2PPF3 MARK2P9-201ENST00000430958 1727 ntBASIC11.97□□□□□ -0.49
DUXBA0A1W2PPF3 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
DUXBA0A1W2PPF3 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
DUXBA0A1W2PPF3 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
DUXBA0A1W2PPF3 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC11.97□□□□□ -0.49
DUXBA0A1W2PPF3 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC11.97□□□□□ -0.49
DUXBA0A1W2PPF3 AL590440.2-201ENST00000641973 1595 ntBASIC11.97□□□□□ -0.49
DUXBA0A1W2PPF3 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
DUXBA0A1W2PPF3 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
DUXBA0A1W2PPF3 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC11.97□□□□□ -0.49
DUXBA0A1W2PPF3 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
DUXBA0A1W2PPF3 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
DUXBA0A1W2PPF3 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC11.97□□□□□ -0.49
DUXBA0A1W2PPF3 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
DUXBA0A1W2PPF3 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
DUXBA0A1W2PPF3 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
DUXBA0A1W2PPF3 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
DUXBA0A1W2PPF3 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC11.97□□□□□ -0.49
DUXBA0A1W2PPF3 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC11.97□□□□□ -0.49
DUXBA0A1W2PPF3 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC11.97□□□□□ -0.49
DUXBA0A1W2PPF3 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
DUXBA0A1W2PPF3 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC11.97□□□□□ -0.49
DUXBA0A1W2PPF3 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC11.97□□□□□ -0.49
DUXBA0A1W2PPF3 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
DUXBA0A1W2PPF3 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC11.97□□□□□ -0.49
DUXBA0A1W2PPF3 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC11.97□□□□□ -0.49
DUXBA0A1W2PPF3 AK2P2-201ENST00000439142 405 ntBASIC11.97□□□□□ -0.49
DUXBA0A1W2PPF3 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms