Protein–RNA interactions for Protein: Q9Y2H6

FNDC3A, Fibronectin type-III domain-containing protein 3A, humanhuman

Known RBP Predictions only

Length 1,198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3AQ9Y2H6 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC15.08■□□□□ 0
FNDC3AQ9Y2H6 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
FNDC3AQ9Y2H6 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
FNDC3AQ9Y2H6 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
FNDC3AQ9Y2H6 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
FNDC3AQ9Y2H6 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC15.08■□□□□ 0
FNDC3AQ9Y2H6 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC15.08■□□□□ 0
FNDC3AQ9Y2H6 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC15.08■□□□□ 0
FNDC3AQ9Y2H6 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC15.08■□□□□ 0
FNDC3AQ9Y2H6 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
FNDC3AQ9Y2H6 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC15.07■□□□□ 0
FNDC3AQ9Y2H6 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
FNDC3AQ9Y2H6 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
FNDC3AQ9Y2H6 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
FNDC3AQ9Y2H6 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
FNDC3AQ9Y2H6 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
FNDC3AQ9Y2H6 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC15.07■□□□□ 0
FNDC3AQ9Y2H6 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC15.07■□□□□ 0
FNDC3AQ9Y2H6 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
FNDC3AQ9Y2H6 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC15.07■□□□□ 0
FNDC3AQ9Y2H6 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
FNDC3AQ9Y2H6 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC15.07■□□□□ 0
FNDC3AQ9Y2H6 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC15.07■□□□□ 0
FNDC3AQ9Y2H6 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC15.07■□□□□ 0
FNDC3AQ9Y2H6 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC15.07■□□□□ 0
FNDC3AQ9Y2H6 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC15.07■□□□□ 0
FNDC3AQ9Y2H6 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC15.07■□□□□ 0
FNDC3AQ9Y2H6 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC15.07■□□□□ 0
FNDC3AQ9Y2H6 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC15.07■□□□□ 0
FNDC3AQ9Y2H6 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
FNDC3AQ9Y2H6 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC15.07■□□□□ 0
FNDC3AQ9Y2H6 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC15.07■□□□□ 0
FNDC3AQ9Y2H6 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC15.07■□□□□ 0
FNDC3AQ9Y2H6 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC15.07■□□□□ 0
FNDC3AQ9Y2H6 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC15.07■□□□□ 0
FNDC3AQ9Y2H6 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
FNDC3AQ9Y2H6 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
FNDC3AQ9Y2H6 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
FNDC3AQ9Y2H6 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC15.07■□□□□ 0
FNDC3AQ9Y2H6 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
FNDC3AQ9Y2H6 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC15.07■□□□□ 0
FNDC3AQ9Y2H6 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
FNDC3AQ9Y2H6 PEG13-201ENST00000631594 5667 ntBASIC15.07■□□□□ 0
FNDC3AQ9Y2H6 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC15.07■□□□□ 0
FNDC3AQ9Y2H6 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
FNDC3AQ9Y2H6 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC15.07■□□□□ 0
FNDC3AQ9Y2H6 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC15.07■□□□□ 0
FNDC3AQ9Y2H6 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
FNDC3AQ9Y2H6 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
FNDC3AQ9Y2H6 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC15.07■□□□□ 0
FNDC3AQ9Y2H6 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC15.07■□□□□ 0
FNDC3AQ9Y2H6 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC15.07■□□□□ 0
FNDC3AQ9Y2H6 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
FNDC3AQ9Y2H6 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC15.06■□□□□ 0
FNDC3AQ9Y2H6 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
FNDC3AQ9Y2H6 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC15.06■□□□□ 0
FNDC3AQ9Y2H6 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
FNDC3AQ9Y2H6 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
FNDC3AQ9Y2H6 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC15.06■□□□□ 0
FNDC3AQ9Y2H6 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC15.06■□□□□ 0
FNDC3AQ9Y2H6 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
FNDC3AQ9Y2H6 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
FNDC3AQ9Y2H6 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
FNDC3AQ9Y2H6 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC15.06■□□□□ 0
FNDC3AQ9Y2H6 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
FNDC3AQ9Y2H6 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
FNDC3AQ9Y2H6 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC15.06■□□□□ 0
FNDC3AQ9Y2H6 AC126915.1-201ENST00000522847 1038 ntBASIC15.06■□□□□ 0
FNDC3AQ9Y2H6 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC15.06■□□□□ 0
FNDC3AQ9Y2H6 NDUFV2P1-201ENST00000596415 907 ntBASIC15.06■□□□□ 0
FNDC3AQ9Y2H6 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC15.06■□□□□ 0
FNDC3AQ9Y2H6 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC15.06■□□□□ 0
FNDC3AQ9Y2H6 AC138627.1-207ENST00000641560 1006 ntBASIC15.06■□□□□ 0
FNDC3AQ9Y2H6 AL031595.1-201ENST00000623969 4709 ntBASIC15.06■□□□□ 0
FNDC3AQ9Y2H6 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC15.06■□□□□ 0
FNDC3AQ9Y2H6 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
FNDC3AQ9Y2H6 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC15.06■□□□□ 0
FNDC3AQ9Y2H6 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
FNDC3AQ9Y2H6 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC15.06■□□□□ 0
FNDC3AQ9Y2H6 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
FNDC3AQ9Y2H6 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
FNDC3AQ9Y2H6 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC15.06■□□□□ 0
FNDC3AQ9Y2H6 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
FNDC3AQ9Y2H6 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
FNDC3AQ9Y2H6 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
FNDC3AQ9Y2H6 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
FNDC3AQ9Y2H6 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC15.06■□□□□ 0
FNDC3AQ9Y2H6 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC15.06■□□□□ 0
FNDC3AQ9Y2H6 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC15.06■□□□□ 0
FNDC3AQ9Y2H6 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
FNDC3AQ9Y2H6 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
FNDC3AQ9Y2H6 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
FNDC3AQ9Y2H6 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
FNDC3AQ9Y2H6 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ 0
FNDC3AQ9Y2H6 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC15.05■□□□□ 0
FNDC3AQ9Y2H6 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC15.05■□□□□ 0
FNDC3AQ9Y2H6 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ 0
FNDC3AQ9Y2H6 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ -0
FNDC3AQ9Y2H6 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
FNDC3AQ9Y2H6 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms