Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
NPIPA1Q9UND3 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC13.56□□□□□ -0.24
NPIPA1Q9UND3 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
NPIPA1Q9UND3 AP000593.2-201ENST00000542775 1433 ntBASIC13.56□□□□□ -0.24
NPIPA1Q9UND3 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC13.56□□□□□ -0.24
NPIPA1Q9UND3 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
NPIPA1Q9UND3 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
NPIPA1Q9UND3 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC13.56□□□□□ -0.24
NPIPA1Q9UND3 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC13.56□□□□□ -0.24
NPIPA1Q9UND3 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC13.56□□□□□ -0.24
NPIPA1Q9UND3 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
NPIPA1Q9UND3 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
NPIPA1Q9UND3 AC018442.1-201ENST00000421439 2061 ntBASIC13.56□□□□□ -0.24
NPIPA1Q9UND3 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
NPIPA1Q9UND3 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
NPIPA1Q9UND3 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC13.56□□□□□ -0.24
NPIPA1Q9UND3 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
NPIPA1Q9UND3 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
NPIPA1Q9UND3 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
NPIPA1Q9UND3 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
NPIPA1Q9UND3 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
NPIPA1Q9UND3 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
NPIPA1Q9UND3 AC092506.1-202ENST00000401022 528 ntBASIC13.56□□□□□ -0.24
NPIPA1Q9UND3 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC13.56□□□□□ -0.24
NPIPA1Q9UND3 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC13.56□□□□□ -0.24
NPIPA1Q9UND3 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
NPIPA1Q9UND3 Z97180.1-201ENST00000445173 988 ntBASIC13.56□□□□□ -0.24
NPIPA1Q9UND3 UPF3AP2-201ENST00000457924 1132 ntBASIC13.56□□□□□ -0.24
NPIPA1Q9UND3 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC13.56□□□□□ -0.24
NPIPA1Q9UND3 AC106794.1-201ENST00000506935 792 ntBASIC13.56□□□□□ -0.24
NPIPA1Q9UND3 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC13.56□□□□□ -0.24
NPIPA1Q9UND3 RNA5SP423-201ENST00000517127 109 ntBASIC13.56□□□□□ -0.24
NPIPA1Q9UND3 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
NPIPA1Q9UND3 EID1-202ENST00000560490 584 ntTSL 3 BASIC13.56□□□□□ -0.24
NPIPA1Q9UND3 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC13.56□□□□□ -0.24
NPIPA1Q9UND3 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
NPIPA1Q9UND3 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC13.56□□□□□ -0.24
NPIPA1Q9UND3 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
NPIPA1Q9UND3 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
NPIPA1Q9UND3 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
NPIPA1Q9UND3 AC018529.2-202ENST00000611482 3087 ntBASIC13.56□□□□□ -0.24
NPIPA1Q9UND3 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
NPIPA1Q9UND3 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
NPIPA1Q9UND3 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
NPIPA1Q9UND3 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC13.56□□□□□ -0.24
NPIPA1Q9UND3 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
NPIPA1Q9UND3 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
NPIPA1Q9UND3 LINC00552-201ENST00000625151 2579 ntBASIC13.56□□□□□ -0.24
NPIPA1Q9UND3 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
NPIPA1Q9UND3 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
NPIPA1Q9UND3 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
NPIPA1Q9UND3 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC13.56□□□□□ -0.24
NPIPA1Q9UND3 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
NPIPA1Q9UND3 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC13.56□□□□□ -0.24
NPIPA1Q9UND3 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
NPIPA1Q9UND3 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
NPIPA1Q9UND3 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
NPIPA1Q9UND3 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
NPIPA1Q9UND3 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NPIPA1Q9UND3 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NPIPA1Q9UND3 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NPIPA1Q9UND3 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NPIPA1Q9UND3 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
NPIPA1Q9UND3 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NPIPA1Q9UND3 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
NPIPA1Q9UND3 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
NPIPA1Q9UND3 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC13.55□□□□□ -0.24
NPIPA1Q9UND3 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NPIPA1Q9UND3 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NPIPA1Q9UND3 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NPIPA1Q9UND3 INE2-201ENST00000630399 1874 ntBASIC13.55□□□□□ -0.24
NPIPA1Q9UND3 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NPIPA1Q9UND3 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
NPIPA1Q9UND3 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NPIPA1Q9UND3 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NPIPA1Q9UND3 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
NPIPA1Q9UND3 COCH-203ENST00000460581 2688 ntTSL 2 BASIC13.55□□□□□ -0.24
NPIPA1Q9UND3 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
NPIPA1Q9UND3 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
NPIPA1Q9UND3 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC13.55□□□□□ -0.24
NPIPA1Q9UND3 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
NPIPA1Q9UND3 CRCP-204ENST00000398684 492 ntTSL 2 BASIC13.55□□□□□ -0.24
NPIPA1Q9UND3 AL133466.1-201ENST00000447582 150 ntBASIC13.55□□□□□ -0.24
NPIPA1Q9UND3 SPTLC1P5-201ENST00000450718 252 ntBASIC13.55□□□□□ -0.24
NPIPA1Q9UND3 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC13.55□□□□□ -0.24
NPIPA1Q9UND3 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC13.55□□□□□ -0.24
NPIPA1Q9UND3 SDHD-202ENST00000525291 790 ntTSL 3 BASIC13.55□□□□□ -0.24
NPIPA1Q9UND3 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC13.55□□□□□ -0.24
NPIPA1Q9UND3 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC13.55□□□□□ -0.24
NPIPA1Q9UND3 AC100827.2-201ENST00000563214 1194 ntBASIC13.55□□□□□ -0.24
NPIPA1Q9UND3 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC13.55□□□□□ -0.24
NPIPA1Q9UND3 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC13.55□□□□□ -0.24
NPIPA1Q9UND3 RPS15-202ENST00000585665 467 ntTSL 3 BASIC13.55□□□□□ -0.24
NPIPA1Q9UND3 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC13.55□□□□□ -0.24
NPIPA1Q9UND3 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC13.55□□□□□ -0.24
NPIPA1Q9UND3 CU633904.3-201ENST00000624042 1029 ntBASIC13.55□□□□□ -0.24
NPIPA1Q9UND3 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
NPIPA1Q9UND3 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC13.55□□□□□ -0.24
NPIPA1Q9UND3 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
NPIPA1Q9UND3 AC138627.1-207ENST00000641560 1006 ntBASIC13.55□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms