Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CISHQ9NSE2 AC144522.1-201ENST00000625111 1658 ntBASIC15.57■□□□□ 0.08
CISHQ9NSE2 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CISHQ9NSE2 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
CISHQ9NSE2 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
CISHQ9NSE2 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
CISHQ9NSE2 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
CISHQ9NSE2 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CISHQ9NSE2 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
CISHQ9NSE2 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC15.57■□□□□ 0.08
CISHQ9NSE2 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
CISHQ9NSE2 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
CISHQ9NSE2 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CISHQ9NSE2 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CISHQ9NSE2 HSPA8P5-201ENST00000456928 2069 ntBASIC15.57■□□□□ 0.08
CISHQ9NSE2 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
CISHQ9NSE2 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC15.57■□□□□ 0.08
CISHQ9NSE2 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC15.57■□□□□ 0.08
CISHQ9NSE2 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
CISHQ9NSE2 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC15.57■□□□□ 0.08
CISHQ9NSE2 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC15.57■□□□□ 0.08
CISHQ9NSE2 RPL18P13-201ENST00000478088 569 ntBASIC15.57■□□□□ 0.08
CISHQ9NSE2 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC15.57■□□□□ 0.08
CISHQ9NSE2 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CISHQ9NSE2 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC15.57■□□□□ 0.08
CISHQ9NSE2 BNIP3P13-201ENST00000599968 566 ntBASIC15.57■□□□□ 0.08
CISHQ9NSE2 AC022748.3-201ENST00000621828 275 ntBASIC15.57■□□□□ 0.08
CISHQ9NSE2 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CISHQ9NSE2 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CISHQ9NSE2 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
CISHQ9NSE2 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC15.57■□□□□ 0.08
CISHQ9NSE2 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CISHQ9NSE2 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC15.57■□□□□ 0.08
CISHQ9NSE2 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC15.57■□□□□ 0.08
CISHQ9NSE2 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC15.57■□□□□ 0.08
CISHQ9NSE2 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CISHQ9NSE2 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CISHQ9NSE2 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CISHQ9NSE2 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC15.57■□□□□ 0.08
CISHQ9NSE2 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
CISHQ9NSE2 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CISHQ9NSE2 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CISHQ9NSE2 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
CISHQ9NSE2 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC15.56■□□□□ 0.08
CISHQ9NSE2 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CISHQ9NSE2 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CISHQ9NSE2 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CISHQ9NSE2 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
CISHQ9NSE2 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CISHQ9NSE2 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CISHQ9NSE2 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC15.56■□□□□ 0.08
CISHQ9NSE2 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
CISHQ9NSE2 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CISHQ9NSE2 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CISHQ9NSE2 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CISHQ9NSE2 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CISHQ9NSE2 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC15.56■□□□□ 0.08
CISHQ9NSE2 KRTAP10-13P-201ENST00000412914 571 ntBASIC15.56■□□□□ 0.08
CISHQ9NSE2 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC15.56■□□□□ 0.08
CISHQ9NSE2 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CISHQ9NSE2 ACTBP11-201ENST00000436287 1126 ntBASIC15.56■□□□□ 0.08
CISHQ9NSE2 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CISHQ9NSE2 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC15.56■□□□□ 0.08
CISHQ9NSE2 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC15.56■□□□□ 0.08
CISHQ9NSE2 AC006122.1-201ENST00000493323 440 ntBASIC15.56■□□□□ 0.08
CISHQ9NSE2 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC15.56■□□□□ 0.08
CISHQ9NSE2 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC15.56■□□□□ 0.08
CISHQ9NSE2 PCBP2-OT1-201ENST00000634357 590 ntBASIC15.56■□□□□ 0.08
CISHQ9NSE2 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC15.56■□□□□ 0.08
CISHQ9NSE2 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC15.56■□□□□ 0.08
CISHQ9NSE2 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CISHQ9NSE2 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CISHQ9NSE2 AC020910.6-201ENST00000623084 1459 ntBASIC15.56■□□□□ 0.08
CISHQ9NSE2 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CISHQ9NSE2 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
CISHQ9NSE2 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
CISHQ9NSE2 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
CISHQ9NSE2 CYP4F23P-201ENST00000593402 1579 ntBASIC15.56■□□□□ 0.08
CISHQ9NSE2 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC15.56■□□□□ 0.08
CISHQ9NSE2 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
CISHQ9NSE2 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CISHQ9NSE2 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
CISHQ9NSE2 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CISHQ9NSE2 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CISHQ9NSE2 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CISHQ9NSE2 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CISHQ9NSE2 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC15.56■□□□□ 0.08
CISHQ9NSE2 AC136759.1-202ENST00000530858 2194 ntBASIC15.56■□□□□ 0.08
CISHQ9NSE2 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
CISHQ9NSE2 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC15.56■□□□□ 0.08
CISHQ9NSE2 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC15.56■□□□□ 0.08
CISHQ9NSE2 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
CISHQ9NSE2 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
CISHQ9NSE2 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CISHQ9NSE2 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CISHQ9NSE2 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CISHQ9NSE2 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC15.55■□□□□ 0.08
CISHQ9NSE2 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CISHQ9NSE2 ABR-228ENST00000574437 3196 ntTSL 5 BASIC15.55■□□□□ 0.08
CISHQ9NSE2 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms