Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
COL21A1Q96P44 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC13.92□□□□□ -0.18
COL21A1Q96P44 AL138709.1-201ENST00000614840 1693 ntBASIC13.92□□□□□ -0.18
COL21A1Q96P44 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
COL21A1Q96P44 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
COL21A1Q96P44 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
COL21A1Q96P44 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
COL21A1Q96P44 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC13.92□□□□□ -0.18
COL21A1Q96P44 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
COL21A1Q96P44 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC13.92□□□□□ -0.18
COL21A1Q96P44 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
COL21A1Q96P44 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
COL21A1Q96P44 ZBTB12BP-201ENST00000314232 1122 ntBASIC13.92□□□□□ -0.18
COL21A1Q96P44 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC13.92□□□□□ -0.18
COL21A1Q96P44 LBX2-201ENST00000341396 886 ntTSL 3 BASIC13.92□□□□□ -0.18
COL21A1Q96P44 GUK1-206ENST00000366723 845 ntTSL 5 BASIC13.92□□□□□ -0.18
COL21A1Q96P44 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
COL21A1Q96P44 HIST1H2BPS3-201ENST00000419683 341 ntBASIC13.92□□□□□ -0.18
COL21A1Q96P44 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
COL21A1Q96P44 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC13.92□□□□□ -0.18
COL21A1Q96P44 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
COL21A1Q96P44 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC13.92□□□□□ -0.18
COL21A1Q96P44 KRT17P8-201ENST00000540749 863 ntBASIC13.92□□□□□ -0.18
COL21A1Q96P44 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
COL21A1Q96P44 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC13.92□□□□□ -0.18
COL21A1Q96P44 AC025279.2-201ENST00000569730 653 ntBASIC13.92□□□□□ -0.18
COL21A1Q96P44 RN7SL48P-201ENST00000579283 293 ntBASIC13.92□□□□□ -0.18
COL21A1Q96P44 GNRHR2-203ENST00000581100 1187 ntBASIC13.92□□□□□ -0.18
COL21A1Q96P44 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
COL21A1Q96P44 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC13.92□□□□□ -0.18
COL21A1Q96P44 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC13.92□□□□□ -0.18
COL21A1Q96P44 AC132938.4-201ENST00000623835 848 ntBASIC13.92□□□□□ -0.18
COL21A1Q96P44 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC13.92□□□□□ -0.18
COL21A1Q96P44 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC13.92□□□□□ -0.18
COL21A1Q96P44 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
COL21A1Q96P44 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
COL21A1Q96P44 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
COL21A1Q96P44 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
COL21A1Q96P44 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
COL21A1Q96P44 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC13.92□□□□□ -0.18
COL21A1Q96P44 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
COL21A1Q96P44 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
COL21A1Q96P44 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
COL21A1Q96P44 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC13.92□□□□□ -0.18
COL21A1Q96P44 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC13.92□□□□□ -0.18
COL21A1Q96P44 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
COL21A1Q96P44 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC13.92□□□□□ -0.18
COL21A1Q96P44 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
COL21A1Q96P44 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC13.92□□□□□ -0.18
COL21A1Q96P44 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
COL21A1Q96P44 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
COL21A1Q96P44 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
COL21A1Q96P44 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
COL21A1Q96P44 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC13.92□□□□□ -0.18
COL21A1Q96P44 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
COL21A1Q96P44 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
COL21A1Q96P44 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
COL21A1Q96P44 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
COL21A1Q96P44 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC13.91□□□□□ -0.18
COL21A1Q96P44 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
COL21A1Q96P44 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
COL21A1Q96P44 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
COL21A1Q96P44 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
COL21A1Q96P44 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC13.91□□□□□ -0.18
COL21A1Q96P44 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
COL21A1Q96P44 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC13.91□□□□□ -0.18
COL21A1Q96P44 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
COL21A1Q96P44 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
COL21A1Q96P44 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
COL21A1Q96P44 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
COL21A1Q96P44 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
COL21A1Q96P44 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC13.91□□□□□ -0.18
COL21A1Q96P44 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC13.91□□□□□ -0.18
COL21A1Q96P44 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC13.91□□□□□ -0.18
COL21A1Q96P44 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
COL21A1Q96P44 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
COL21A1Q96P44 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
COL21A1Q96P44 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC13.91□□□□□ -0.18
COL21A1Q96P44 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
COL21A1Q96P44 AC234783.1-201ENST00000441761 496 ntBASIC13.91□□□□□ -0.18
COL21A1Q96P44 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
COL21A1Q96P44 AC007551.1-201ENST00000457394 519 ntBASIC13.91□□□□□ -0.18
COL21A1Q96P44 FTH1P14-201ENST00000482930 551 ntBASIC13.91□□□□□ -0.18
COL21A1Q96P44 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
COL21A1Q96P44 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
COL21A1Q96P44 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC13.91□□□□□ -0.18
COL21A1Q96P44 RPL28-206ENST00000558752 671 ntTSL 3 BASIC13.91□□□□□ -0.18
COL21A1Q96P44 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC13.91□□□□□ -0.18
COL21A1Q96P44 RAB43P1-201ENST00000561790 589 ntBASIC13.91□□□□□ -0.18
COL21A1Q96P44 ORC6-206ENST00000568364 888 ntTSL 5 BASIC13.91□□□□□ -0.18
COL21A1Q96P44 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC13.91□□□□□ -0.18
COL21A1Q96P44 AC239800.4-201ENST00000603712 296 ntBASIC13.91□□□□□ -0.18
COL21A1Q96P44 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC13.91□□□□□ -0.18
COL21A1Q96P44 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC13.91□□□□□ -0.18
COL21A1Q96P44 ENPP7P14-201ENST00000621765 1040 ntBASIC13.91□□□□□ -0.18
COL21A1Q96P44 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC13.91□□□□□ -0.18
COL21A1Q96P44 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
COL21A1Q96P44 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
COL21A1Q96P44 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
COL21A1Q96P44 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms