Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 AC015802.1-201ENST00000588104 1449 ntBASIC17.46■□□□□ 0.39
DDX11Q96FC9 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
DDX11Q96FC9 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
DDX11Q96FC9 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
DDX11Q96FC9 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC17.45■□□□□ 0.38
DDX11Q96FC9 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
DDX11Q96FC9 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
DDX11Q96FC9 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
DDX11Q96FC9 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC17.45■□□□□ 0.38
DDX11Q96FC9 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC17.45■□□□□ 0.38
DDX11Q96FC9 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC17.45■□□□□ 0.38
DDX11Q96FC9 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
DDX11Q96FC9 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
DDX11Q96FC9 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
DDX11Q96FC9 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
DDX11Q96FC9 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC17.45■□□□□ 0.38
DDX11Q96FC9 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
DDX11Q96FC9 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC17.45■□□□□ 0.38
DDX11Q96FC9 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
DDX11Q96FC9 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC17.45■□□□□ 0.38
DDX11Q96FC9 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
DDX11Q96FC9 CALR4P-201ENST00000431943 946 ntBASIC17.45■□□□□ 0.38
DDX11Q96FC9 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC17.45■□□□□ 0.38
DDX11Q96FC9 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC17.45■□□□□ 0.38
DDX11Q96FC9 COX5BP1-201ENST00000507622 393 ntBASIC17.45■□□□□ 0.38
DDX11Q96FC9 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
DDX11Q96FC9 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
DDX11Q96FC9 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC17.45■□□□□ 0.38
DDX11Q96FC9 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
DDX11Q96FC9 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC17.45■□□□□ 0.38
DDX11Q96FC9 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC17.45■□□□□ 0.38
DDX11Q96FC9 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
DDX11Q96FC9 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
DDX11Q96FC9 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
DDX11Q96FC9 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
DDX11Q96FC9 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
DDX11Q96FC9 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
DDX11Q96FC9 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
DDX11Q96FC9 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
DDX11Q96FC9 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
DDX11Q96FC9 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
DDX11Q96FC9 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
DDX11Q96FC9 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC17.44■□□□□ 0.38
DDX11Q96FC9 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
DDX11Q96FC9 AC003102.2-201ENST00000589195 1469 ntBASIC17.44■□□□□ 0.38
DDX11Q96FC9 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
DDX11Q96FC9 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
DDX11Q96FC9 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
DDX11Q96FC9 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
DDX11Q96FC9 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
DDX11Q96FC9 ANKRD30BP2-201ENST00000435744 1610 ntBASIC17.44■□□□□ 0.38
DDX11Q96FC9 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
DDX11Q96FC9 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
DDX11Q96FC9 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
DDX11Q96FC9 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
DDX11Q96FC9 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
DDX11Q96FC9 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
DDX11Q96FC9 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
DDX11Q96FC9 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC17.44■□□□□ 0.38
DDX11Q96FC9 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC17.44■□□□□ 0.38
DDX11Q96FC9 PTPA-218ENST00000435132 618 ntTSL 2 BASIC17.44■□□□□ 0.38
DDX11Q96FC9 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
DDX11Q96FC9 AKR7A2P1-201ENST00000460134 915 ntBASIC17.44■□□□□ 0.38
DDX11Q96FC9 APOA2-204ENST00000464492 530 ntTSL 3 BASIC17.44■□□□□ 0.38
DDX11Q96FC9 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC17.44■□□□□ 0.38
DDX11Q96FC9 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
DDX11Q96FC9 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC17.44■□□□□ 0.38
DDX11Q96FC9 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
DDX11Q96FC9 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
DDX11Q96FC9 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC17.44■□□□□ 0.38
DDX11Q96FC9 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC17.44■□□□□ 0.38
DDX11Q96FC9 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
DDX11Q96FC9 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
DDX11Q96FC9 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
DDX11Q96FC9 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
DDX11Q96FC9 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
DDX11Q96FC9 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
DDX11Q96FC9 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC17.44■□□□□ 0.38
DDX11Q96FC9 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
DDX11Q96FC9 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
DDX11Q96FC9 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
DDX11Q96FC9 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
DDX11Q96FC9 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC17.44■□□□□ 0.38
DDX11Q96FC9 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
DDX11Q96FC9 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC17.44■□□□□ 0.38
DDX11Q96FC9 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC17.44■□□□□ 0.38
DDX11Q96FC9 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
DDX11Q96FC9 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
DDX11Q96FC9 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
DDX11Q96FC9 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
DDX11Q96FC9 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
DDX11Q96FC9 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC17.43■□□□□ 0.38
DDX11Q96FC9 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
DDX11Q96FC9 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
DDX11Q96FC9 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC17.43■□□□□ 0.38
DDX11Q96FC9 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
DDX11Q96FC9 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
DDX11Q96FC9 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
DDX11Q96FC9 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC17.43■□□□□ 0.38
DDX11Q96FC9 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms