Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
DDX1Q92499 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC15.56■□□□□ 0.08
DDX1Q92499 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
DDX1Q92499 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
DDX1Q92499 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
DDX1Q92499 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
DDX1Q92499 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
DDX1Q92499 HNRNPA1P27-201ENST00000412087 955 ntBASIC15.56■□□□□ 0.08
DDX1Q92499 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC15.56■□□□□ 0.08
DDX1Q92499 RPS2P36-201ENST00000456516 831 ntBASIC15.56■□□□□ 0.08
DDX1Q92499 AC100850.1-201ENST00000506768 649 ntBASIC15.56■□□□□ 0.08
DDX1Q92499 NCK2-206ENST00000522586 490 ntTSL 5 BASIC15.56■□□□□ 0.08
DDX1Q92499 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC15.56■□□□□ 0.08
DDX1Q92499 HNRNPA1P48-202ENST00000565308 961 ntBASIC15.56■□□□□ 0.08
DDX1Q92499 MIR4706-201ENST00000582134 82 ntBASIC15.56■□□□□ 0.08
DDX1Q92499 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
DDX1Q92499 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
DDX1Q92499 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC15.56■□□□□ 0.08
DDX1Q92499 TMBIM7P-202ENST00000641474 1516 ntBASIC15.56■□□□□ 0.08
DDX1Q92499 KRT8P24-201ENST00000560290 1559 ntBASIC15.56■□□□□ 0.08
DDX1Q92499 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
DDX1Q92499 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC15.56■□□□□ 0.08
DDX1Q92499 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
DDX1Q92499 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
DDX1Q92499 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC15.56■□□□□ 0.08
DDX1Q92499 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
DDX1Q92499 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
DDX1Q92499 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
DDX1Q92499 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
DDX1Q92499 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
DDX1Q92499 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
DDX1Q92499 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
DDX1Q92499 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
DDX1Q92499 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC15.56■□□□□ 0.08
DDX1Q92499 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
DDX1Q92499 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
DDX1Q92499 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
DDX1Q92499 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC15.55■□□□□ 0.08
DDX1Q92499 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
DDX1Q92499 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
DDX1Q92499 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
DDX1Q92499 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
DDX1Q92499 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC15.55■□□□□ 0.08
DDX1Q92499 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
DDX1Q92499 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
DDX1Q92499 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
DDX1Q92499 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
DDX1Q92499 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC15.55■□□□□ 0.08
DDX1Q92499 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
DDX1Q92499 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
DDX1Q92499 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
DDX1Q92499 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
DDX1Q92499 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
DDX1Q92499 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
DDX1Q92499 HARS-202ENST00000415192 1401 ntTSL 2 BASIC15.55■□□□□ 0.08
DDX1Q92499 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC15.55■□□□□ 0.08
DDX1Q92499 RBM38-204ENST00000371219 760 ntTSL 2 BASIC15.55■□□□□ 0.08
DDX1Q92499 AK6-201ENST00000380818 1183 ntTSL 2 BASIC15.55■□□□□ 0.08
DDX1Q92499 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
DDX1Q92499 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC15.55■□□□□ 0.08
DDX1Q92499 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC15.55■□□□□ 0.08
DDX1Q92499 AC005077.2-201ENST00000449786 690 ntBASIC15.55■□□□□ 0.08
DDX1Q92499 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC15.55■□□□□ 0.08
DDX1Q92499 HOMER2P2-201ENST00000451621 847 ntBASIC15.55■□□□□ 0.08
DDX1Q92499 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC15.55■□□□□ 0.08
DDX1Q92499 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC15.55■□□□□ 0.08
DDX1Q92499 AC105129.2-201ENST00000559536 390 ntBASIC15.55■□□□□ 0.08
DDX1Q92499 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
DDX1Q92499 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC15.55■□□□□ 0.08
DDX1Q92499 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC15.55■□□□□ 0.08
DDX1Q92499 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC15.55■□□□□ 0.08
DDX1Q92499 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
DDX1Q92499 AC132192.2-201ENST00000596206 1147 ntBASIC15.55■□□□□ 0.08
DDX1Q92499 AC009955.4-201ENST00000597192 544 ntBASIC15.55■□□□□ 0.08
DDX1Q92499 U62317.3-201ENST00000608319 855 ntBASIC15.55■□□□□ 0.08
DDX1Q92499 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC15.55■□□□□ 0.08
DDX1Q92499 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC15.55■□□□□ 0.08
DDX1Q92499 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
DDX1Q92499 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
DDX1Q92499 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
DDX1Q92499 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
DDX1Q92499 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC15.55■□□□□ 0.08
DDX1Q92499 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC15.55■□□□□ 0.08
DDX1Q92499 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
DDX1Q92499 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
DDX1Q92499 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
DDX1Q92499 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
DDX1Q92499 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
DDX1Q92499 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC15.55■□□□□ 0.08
DDX1Q92499 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
DDX1Q92499 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
DDX1Q92499 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
DDX1Q92499 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
DDX1Q92499 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
DDX1Q92499 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
DDX1Q92499 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
DDX1Q92499 AL023775.1-201ENST00000454907 1746 ntBASIC15.54■□□□□ 0.08
DDX1Q92499 AC067930.6-201ENST00000623257 4947 ntBASIC15.54■□□□□ 0.08
DDX1Q92499 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
DDX1Q92499 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms