Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC5.65□□□□□ -1.5
SYNE2Q8WXH0 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC5.65□□□□□ -1.5
SYNE2Q8WXH0 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
SYNE2Q8WXH0 NME1-201ENST00000013034 796 ntTSL 3 BASIC5.65□□□□□ -1.5
SYNE2Q8WXH0 AC090559.2-201ENST00000366360 430 ntTSL 5 BASIC5.65□□□□□ -1.5
SYNE2Q8WXH0 HSD17B3-202ENST00000375263 1135 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
SYNE2Q8WXH0 CTF2P-201ENST00000412003 604 ntBASIC5.65□□□□□ -1.5
SYNE2Q8WXH0 AL450304.1-201ENST00000418657 759 ntBASIC5.65□□□□□ -1.5
SYNE2Q8WXH0 AC104115.1-201ENST00000484005 623 ntBASIC5.65□□□□□ -1.5
SYNE2Q8WXH0 AC022733.2-201ENST00000520487 531 ntTSL 2 BASIC5.65□□□□□ -1.5
SYNE2Q8WXH0 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
SYNE2Q8WXH0 AC025265.3-201ENST00000550175 468 ntTSL 3 BASIC5.65□□□□□ -1.5
SYNE2Q8WXH0 IGHV1OR16-2-201ENST00000564937 349 ntBASIC5.65□□□□□ -1.5
SYNE2Q8WXH0 ATXN10-212ENST00000640901 1185 ntTSL 5 BASIC5.65□□□□□ -1.5
SYNE2Q8WXH0 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
SYNE2Q8WXH0 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
SYNE2Q8WXH0 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
SYNE2Q8WXH0 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC5.65□□□□□ -1.5
SYNE2Q8WXH0 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC5.65□□□□□ -1.5
SYNE2Q8WXH0 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC5.65□□□□□ -1.5
SYNE2Q8WXH0 TEX101-203ENST00000602198 1446 ntAPPRIS P3 TSL 5 BASIC5.65□□□□□ -1.5
SYNE2Q8WXH0 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
SYNE2Q8WXH0 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
SYNE2Q8WXH0 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
SYNE2Q8WXH0 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
SYNE2Q8WXH0 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
SYNE2Q8WXH0 PDHB-210ENST00000485460 1397 ntTSL 2 BASIC5.65□□□□□ -1.5
SYNE2Q8WXH0 GPR141-201ENST00000334425 918 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
SYNE2Q8WXH0 LYPD4-201ENST00000343055 1051 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
SYNE2Q8WXH0 RN7SKP90-201ENST00000363013 335 ntBASIC5.65□□□□□ -1.5
SYNE2Q8WXH0 WFDC2-204ENST00000372676 614 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
SYNE2Q8WXH0 HBA1-202ENST00000397797 504 ntTSL 2 BASIC5.65□□□□□ -1.5
SYNE2Q8WXH0 AC010163.1-201ENST00000434440 520 ntTSL 2 BASIC5.65□□□□□ -1.5
SYNE2Q8WXH0 TMEM256P2-201ENST00000440241 341 ntBASIC5.65□□□□□ -1.5
SYNE2Q8WXH0 AC007652.1-201ENST00000441150 562 ntTSL 4 BASIC5.65□□□□□ -1.5
SYNE2Q8WXH0 VAMP2-203ENST00000481878 557 ntAPPRIS ALT1 TSL 2 BASIC5.65□□□□□ -1.5
SYNE2Q8WXH0 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC5.65□□□□□ -1.5
SYNE2Q8WXH0 IGHV1OR16-3-201ENST00000568138 205 ntBASIC5.65□□□□□ -1.5
SYNE2Q8WXH0 RN7SL405P-201ENST00000582502 289 ntBASIC5.65□□□□□ -1.5
SYNE2Q8WXH0 LYPD4-202ENST00000601246 1076 ntTSL 5 BASIC5.65□□□□□ -1.5
SYNE2Q8WXH0 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
SYNE2Q8WXH0 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
SYNE2Q8WXH0 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
SYNE2Q8WXH0 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC5.65□□□□□ -1.5
SYNE2Q8WXH0 PTAR1-201ENST00000340434 1417 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
SYNE2Q8WXH0 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
SYNE2Q8WXH0 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC5.65□□□□□ -1.5
SYNE2Q8WXH0 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.5
SYNE2Q8WXH0 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
SYNE2Q8WXH0 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC5.65□□□□□ -1.51
SYNE2Q8WXH0 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC5.65□□□□□ -1.51
SYNE2Q8WXH0 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
SYNE2Q8WXH0 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
SYNE2Q8WXH0 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC5.65□□□□□ -1.51
SYNE2Q8WXH0 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
SYNE2Q8WXH0 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC5.65□□□□□ -1.51
SYNE2Q8WXH0 QRFPR-201ENST00000334383 1215 ntTSL 2 BASIC5.65□□□□□ -1.51
SYNE2Q8WXH0 IGLV1-44-201ENST00000390297 467 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
SYNE2Q8WXH0 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC5.65□□□□□ -1.51
SYNE2Q8WXH0 HLA-W-207ENST00000439514 771 ntBASIC5.65□□□□□ -1.51
SYNE2Q8WXH0 AQP7-207ENST00000447660 998 ntTSL 2 BASIC5.65□□□□□ -1.51
SYNE2Q8WXH0 RN7SL351P-201ENST00000469306 248 ntBASIC5.65□□□□□ -1.51
SYNE2Q8WXH0 FAR1-IT1-201ENST00000525233 368 ntTSL 3 BASIC5.65□□□□□ -1.51
SYNE2Q8WXH0 AP002495.1-205ENST00000529513 655 ntAPPRIS ALT2 TSL 3 BASIC5.65□□□□□ -1.51
SYNE2Q8WXH0 AL136295.3-201ENST00000558325 850 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
SYNE2Q8WXH0 LINC00470-211ENST00000584492 1281 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
SYNE2Q8WXH0 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
SYNE2Q8WXH0 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
SYNE2Q8WXH0 NR1H3-201ENST00000395397 1501 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
SYNE2Q8WXH0 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
SYNE2Q8WXH0 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
SYNE2Q8WXH0 SLC26A5-201ENST00000306312 2689 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.51
SYNE2Q8WXH0 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
SYNE2Q8WXH0 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.51
SYNE2Q8WXH0 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
SYNE2Q8WXH0 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
SYNE2Q8WXH0 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC5.65□□□□□ -1.51
SYNE2Q8WXH0 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
SYNE2Q8WXH0 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC5.65□□□□□ -1.51
SYNE2Q8WXH0 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
SYNE2Q8WXH0 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC5.65□□□□□ -1.51
SYNE2Q8WXH0 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
SYNE2Q8WXH0 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC5.65□□□□□ -1.51
SYNE2Q8WXH0 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC5.65□□□□□ -1.51
SYNE2Q8WXH0 AP001625.3-201ENST00000416179 449 ntTSL 2 BASIC5.65□□□□□ -1.51
SYNE2Q8WXH0 AL355490.2-201ENST00000422848 548 ntTSL 3 BASIC5.65□□□□□ -1.51
SYNE2Q8WXH0 MUC1-213ENST00000462215 1189 ntTSL 2 BASIC5.65□□□□□ -1.51
SYNE2Q8WXH0 AC079360.1-201ENST00000543848 434 ntTSL 3 BASIC5.65□□□□□ -1.51
SYNE2Q8WXH0 AC104423.1-201ENST00000591742 728 ntTSL 3 BASIC5.65□□□□□ -1.51
SYNE2Q8WXH0 SSX3-204ENST00000612497 1030 ntTSL 5 BASIC5.65□□□□□ -1.51
SYNE2Q8WXH0 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
SYNE2Q8WXH0 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC5.65□□□□□ -1.51
SYNE2Q8WXH0 AC016396.2-201ENST00000562575 1417 ntBASIC5.65□□□□□ -1.51
SYNE2Q8WXH0 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
SYNE2Q8WXH0 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
SYNE2Q8WXH0 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
SYNE2Q8WXH0 TKT-202ENST00000423516 2075 ntTSL 2 BASIC5.65□□□□□ -1.51
SYNE2Q8WXH0 DMC1-207ENST00000616615 1595 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
SYNE2Q8WXH0 GOLGA6L2-202ENST00000345070 1972 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
SYNE2Q8WXH0 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC5.65□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms