Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SLC44A1Q8WWI5 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SLC44A1Q8WWI5 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
SLC44A1Q8WWI5 DFFBP1-201ENST00000433250 979 ntBASIC14.7□□□□□ -0.06
SLC44A1Q8WWI5 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC14.7□□□□□ -0.06
SLC44A1Q8WWI5 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SLC44A1Q8WWI5 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC14.7□□□□□ -0.06
SLC44A1Q8WWI5 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC14.7□□□□□ -0.06
SLC44A1Q8WWI5 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC14.7□□□□□ -0.06
SLC44A1Q8WWI5 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
SLC44A1Q8WWI5 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC14.7□□□□□ -0.06
SLC44A1Q8WWI5 AC068760.1-201ENST00000493579 1953 ntBASIC14.7□□□□□ -0.06
SLC44A1Q8WWI5 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SLC44A1Q8WWI5 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC14.7□□□□□ -0.06
SLC44A1Q8WWI5 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SLC44A1Q8WWI5 TDG-209ENST00000544861 1387 ntTSL 2 BASIC14.7□□□□□ -0.06
SLC44A1Q8WWI5 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
SLC44A1Q8WWI5 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC14.7□□□□□ -0.06
SLC44A1Q8WWI5 AL022313.4-201ENST00000562756 2046 ntBASIC14.7□□□□□ -0.06
SLC44A1Q8WWI5 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC14.7□□□□□ -0.06
SLC44A1Q8WWI5 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SLC44A1Q8WWI5 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
SLC44A1Q8WWI5 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SLC44A1Q8WWI5 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SLC44A1Q8WWI5 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC14.69□□□□□ -0.06
SLC44A1Q8WWI5 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SLC44A1Q8WWI5 FKBP4P6-201ENST00000457486 1332 ntBASIC14.69□□□□□ -0.06
SLC44A1Q8WWI5 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC14.69□□□□□ -0.06
SLC44A1Q8WWI5 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SLC44A1Q8WWI5 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
SLC44A1Q8WWI5 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
SLC44A1Q8WWI5 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC14.69□□□□□ -0.06
SLC44A1Q8WWI5 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC14.69□□□□□ -0.06
SLC44A1Q8WWI5 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC14.69□□□□□ -0.06
SLC44A1Q8WWI5 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
SLC44A1Q8WWI5 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SLC44A1Q8WWI5 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC14.69□□□□□ -0.06
SLC44A1Q8WWI5 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SLC44A1Q8WWI5 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
SLC44A1Q8WWI5 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
SLC44A1Q8WWI5 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
SLC44A1Q8WWI5 NSL1-201ENST00000366976 722 ntTSL 2 BASIC14.69□□□□□ -0.06
SLC44A1Q8WWI5 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SLC44A1Q8WWI5 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SLC44A1Q8WWI5 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC14.69□□□□□ -0.06
SLC44A1Q8WWI5 ARSEP1-201ENST00000420443 635 ntBASIC14.69□□□□□ -0.06
SLC44A1Q8WWI5 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC14.69□□□□□ -0.06
SLC44A1Q8WWI5 BCRP1-201ENST00000444246 691 ntBASIC14.69□□□□□ -0.06
SLC44A1Q8WWI5 SPTLC1P1-201ENST00000447199 261 ntBASIC14.69□□□□□ -0.06
SLC44A1Q8WWI5 AC093433.1-201ENST00000458048 571 ntBASIC14.69□□□□□ -0.06
SLC44A1Q8WWI5 AC093214.1-201ENST00000511688 1107 ntBASIC14.69□□□□□ -0.06
SLC44A1Q8WWI5 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC14.69□□□□□ -0.06
SLC44A1Q8WWI5 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SLC44A1Q8WWI5 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
SLC44A1Q8WWI5 INO80C-206ENST00000586489 594 ntTSL 3 BASIC14.69□□□□□ -0.06
SLC44A1Q8WWI5 KLK3-207ENST00000595952 969 ntTSL 3 BASIC14.69□□□□□ -0.06
SLC44A1Q8WWI5 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC14.69□□□□□ -0.06
SLC44A1Q8WWI5 MVK-217ENST00000639206 367 ntTSL 5 BASIC14.69□□□□□ -0.06
SLC44A1Q8WWI5 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SLC44A1Q8WWI5 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
SLC44A1Q8WWI5 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
SLC44A1Q8WWI5 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
SLC44A1Q8WWI5 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC14.69□□□□□ -0.06
SLC44A1Q8WWI5 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC14.69□□□□□ -0.06
SLC44A1Q8WWI5 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SLC44A1Q8WWI5 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SLC44A1Q8WWI5 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC14.69□□□□□ -0.06
SLC44A1Q8WWI5 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
SLC44A1Q8WWI5 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SLC44A1Q8WWI5 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SLC44A1Q8WWI5 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SLC44A1Q8WWI5 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC14.69□□□□□ -0.06
SLC44A1Q8WWI5 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SLC44A1Q8WWI5 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SLC44A1Q8WWI5 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC14.69□□□□□ -0.06
SLC44A1Q8WWI5 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SLC44A1Q8WWI5 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
SLC44A1Q8WWI5 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SLC44A1Q8WWI5 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
SLC44A1Q8WWI5 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SLC44A1Q8WWI5 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SLC44A1Q8WWI5 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC14.68□□□□□ -0.06
SLC44A1Q8WWI5 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC14.68□□□□□ -0.06
SLC44A1Q8WWI5 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
SLC44A1Q8WWI5 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC14.68□□□□□ -0.06
SLC44A1Q8WWI5 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SLC44A1Q8WWI5 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
SLC44A1Q8WWI5 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SLC44A1Q8WWI5 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
SLC44A1Q8WWI5 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SLC44A1Q8WWI5 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SLC44A1Q8WWI5 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SLC44A1Q8WWI5 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SLC44A1Q8WWI5 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SLC44A1Q8WWI5 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SLC44A1Q8WWI5 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
SLC44A1Q8WWI5 NCLP1-201ENST00000445357 1963 ntBASIC14.68□□□□□ -0.06
SLC44A1Q8WWI5 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
SLC44A1Q8WWI5 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SLC44A1Q8WWI5 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 68.8 ms