Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC12.54□□□□□ -0.4
CLDND2Q8NHS1 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CLDND2Q8NHS1 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CLDND2Q8NHS1 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CLDND2Q8NHS1 PTENP1-202ENST00000532280 3996 ntBASIC12.54□□□□□ -0.4
CLDND2Q8NHS1 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC12.53□□□□□ -0.4
CLDND2Q8NHS1 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CLDND2Q8NHS1 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CLDND2Q8NHS1 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC12.53□□□□□ -0.4
CLDND2Q8NHS1 SLC9A7P1-202ENST00000556476 2239 ntBASIC12.53□□□□□ -0.4
CLDND2Q8NHS1 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
CLDND2Q8NHS1 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CLDND2Q8NHS1 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC12.53□□□□□ -0.4
CLDND2Q8NHS1 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CLDND2Q8NHS1 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CLDND2Q8NHS1 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
CLDND2Q8NHS1 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
CLDND2Q8NHS1 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC12.53□□□□□ -0.4
CLDND2Q8NHS1 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CLDND2Q8NHS1 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
CLDND2Q8NHS1 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CLDND2Q8NHS1 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
CLDND2Q8NHS1 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CLDND2Q8NHS1 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CLDND2Q8NHS1 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
CLDND2Q8NHS1 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC12.53□□□□□ -0.4
CLDND2Q8NHS1 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC12.53□□□□□ -0.4
CLDND2Q8NHS1 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC12.53□□□□□ -0.4
CLDND2Q8NHS1 AC126915.1-201ENST00000522847 1038 ntBASIC12.53□□□□□ -0.4
CLDND2Q8NHS1 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CLDND2Q8NHS1 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC12.53□□□□□ -0.4
CLDND2Q8NHS1 KLK11-210ENST00000600362 759 ntTSL 3 BASIC12.53□□□□□ -0.4
CLDND2Q8NHS1 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC12.53□□□□□ -0.4
CLDND2Q8NHS1 AC068587.10-201ENST00000641210 219 ntBASIC12.53□□□□□ -0.4
CLDND2Q8NHS1 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC12.53□□□□□ -0.4
CLDND2Q8NHS1 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CLDND2Q8NHS1 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC12.53□□□□□ -0.4
CLDND2Q8NHS1 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CLDND2Q8NHS1 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC12.53□□□□□ -0.4
CLDND2Q8NHS1 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CLDND2Q8NHS1 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CLDND2Q8NHS1 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC12.53□□□□□ -0.4
CLDND2Q8NHS1 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CLDND2Q8NHS1 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
CLDND2Q8NHS1 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC12.53□□□□□ -0.4
CLDND2Q8NHS1 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CLDND2Q8NHS1 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CLDND2Q8NHS1 AC138028.6-201ENST00000616106 1482 ntBASIC12.53□□□□□ -0.4
CLDND2Q8NHS1 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
CLDND2Q8NHS1 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC12.52□□□□□ -0.4
CLDND2Q8NHS1 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CLDND2Q8NHS1 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CLDND2Q8NHS1 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CLDND2Q8NHS1 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CLDND2Q8NHS1 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CLDND2Q8NHS1 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
CLDND2Q8NHS1 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CLDND2Q8NHS1 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.4
CLDND2Q8NHS1 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC12.52□□□□□ -0.4
CLDND2Q8NHS1 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
CLDND2Q8NHS1 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
CLDND2Q8NHS1 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC12.52□□□□□ -0.41
CLDND2Q8NHS1 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CLDND2Q8NHS1 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CLDND2Q8NHS1 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC12.52□□□□□ -0.41
CLDND2Q8NHS1 CSH2-202ENST00000345366 598 ntTSL 5 BASIC12.52□□□□□ -0.41
CLDND2Q8NHS1 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
CLDND2Q8NHS1 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CLDND2Q8NHS1 AC004945.1-201ENST00000416738 983 ntBASIC12.52□□□□□ -0.41
CLDND2Q8NHS1 FNTAP2-201ENST00000430308 634 ntBASIC12.52□□□□□ -0.41
CLDND2Q8NHS1 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC12.52□□□□□ -0.41
CLDND2Q8NHS1 AC100850.1-201ENST00000506768 649 ntBASIC12.52□□□□□ -0.41
CLDND2Q8NHS1 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC12.52□□□□□ -0.41
CLDND2Q8NHS1 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CLDND2Q8NHS1 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC12.52□□□□□ -0.41
CLDND2Q8NHS1 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC12.52□□□□□ -0.41
CLDND2Q8NHS1 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC12.52□□□□□ -0.41
CLDND2Q8NHS1 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC12.52□□□□□ -0.41
CLDND2Q8NHS1 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC12.52□□□□□ -0.41
CLDND2Q8NHS1 AL451050.2-201ENST00000606967 682 ntBASIC12.52□□□□□ -0.41
CLDND2Q8NHS1 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC12.52□□□□□ -0.41
CLDND2Q8NHS1 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CLDND2Q8NHS1 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CLDND2Q8NHS1 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC12.52□□□□□ -0.41
CLDND2Q8NHS1 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CLDND2Q8NHS1 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
CLDND2Q8NHS1 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC12.52□□□□□ -0.41
CLDND2Q8NHS1 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CLDND2Q8NHS1 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
CLDND2Q8NHS1 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CLDND2Q8NHS1 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CLDND2Q8NHS1 RDX-218ENST00000544551 4117 ntTSL 2 BASIC12.52□□□□□ -0.41
CLDND2Q8NHS1 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.41
CLDND2Q8NHS1 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CLDND2Q8NHS1 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CLDND2Q8NHS1 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
CLDND2Q8NHS1 INTS4P1-203ENST00000641008 3683 ntBASIC12.52□□□□□ -0.41
CLDND2Q8NHS1 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CLDND2Q8NHS1 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.41
CLDND2Q8NHS1 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms