Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 TMEM9-202ENST00000367332 1544 ntAPPRIS ALT1 TSL 2 BASIC12.1□□□□□ -0.47
CCDC168Q8NDH2 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CCDC168Q8NDH2 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
CCDC168Q8NDH2 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC12.1□□□□□ -0.47
CCDC168Q8NDH2 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
CCDC168Q8NDH2 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
CCDC168Q8NDH2 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC12.1□□□□□ -0.47
CCDC168Q8NDH2 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CCDC168Q8NDH2 RPRD2-201ENST00000369067 1043 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
CCDC168Q8NDH2 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
CCDC168Q8NDH2 EEF1DP5-201ENST00000431410 772 ntBASIC12.1□□□□□ -0.47
CCDC168Q8NDH2 GOLGA6L16P-201ENST00000441780 1299 ntBASIC12.1□□□□□ -0.47
CCDC168Q8NDH2 RPS23-207ENST00000511844 530 ntTSL 2 BASIC12.1□□□□□ -0.47
CCDC168Q8NDH2 AP003351.1-201ENST00000522743 668 ntTSL 3 BASIC12.1□□□□□ -0.47
CCDC168Q8NDH2 APOPT1-215ENST00000556253 783 ntTSL 3 BASIC12.1□□□□□ -0.47
CCDC168Q8NDH2 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC12.1□□□□□ -0.47
CCDC168Q8NDH2 SRRM2-AS1-204ENST00000573802 818 ntTSL 2 BASIC12.1□□□□□ -0.47
CCDC168Q8NDH2 ZFP36-201ENST00000594045 690 ntTSL 3 BASIC12.1□□□□□ -0.47
CCDC168Q8NDH2 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC12.1□□□□□ -0.47
CCDC168Q8NDH2 NEK4P3-201ENST00000604859 544 ntBASIC12.1□□□□□ -0.47
CCDC168Q8NDH2 AL137793.2-201ENST00000632635 659 ntTSL 3 BASIC12.1□□□□□ -0.47
CCDC168Q8NDH2 AC005865.2-202ENST00000635814 725 ntBASIC12.1□□□□□ -0.47
CCDC168Q8NDH2 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC12.1□□□□□ -0.47
CCDC168Q8NDH2 PRMT2-216ENST00000621201 1301 ntTSL 5 BASIC12.1□□□□□ -0.47
CCDC168Q8NDH2 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC12.1□□□□□ -0.47
CCDC168Q8NDH2 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC12.1□□□□□ -0.47
CCDC168Q8NDH2 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CCDC168Q8NDH2 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CCDC168Q8NDH2 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CCDC168Q8NDH2 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC12.1□□□□□ -0.47
CCDC168Q8NDH2 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CCDC168Q8NDH2 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CCDC168Q8NDH2 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CCDC168Q8NDH2 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CCDC168Q8NDH2 AGGF1P1-201ENST00000509500 2073 ntBASIC12.1□□□□□ -0.47
CCDC168Q8NDH2 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC12.1□□□□□ -0.47
CCDC168Q8NDH2 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
CCDC168Q8NDH2 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CCDC168Q8NDH2 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CCDC168Q8NDH2 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CCDC168Q8NDH2 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
CCDC168Q8NDH2 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC12.1□□□□□ -0.47
CCDC168Q8NDH2 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
CCDC168Q8NDH2 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CCDC168Q8NDH2 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC12.1□□□□□ -0.47
CCDC168Q8NDH2 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC12.1□□□□□ -0.47
CCDC168Q8NDH2 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
CCDC168Q8NDH2 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CCDC168Q8NDH2 KCNK18-201ENST00000334549 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CCDC168Q8NDH2 AC006329.1-201ENST00000419422 705 ntTSL 2 BASIC12.1□□□□□ -0.47
CCDC168Q8NDH2 CDCA4P4-201ENST00000435216 680 ntBASIC12.1□□□□□ -0.47
CCDC168Q8NDH2 AC092295.1-201ENST00000446262 434 ntTSL 3 BASIC12.1□□□□□ -0.47
CCDC168Q8NDH2 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
CCDC168Q8NDH2 RN7SL277P-201ENST00000481521 288 ntBASIC12.1□□□□□ -0.47
CCDC168Q8NDH2 RNA5SP406-201ENST00000516106 112 ntBASIC12.1□□□□□ -0.47
CCDC168Q8NDH2 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC12.1□□□□□ -0.47
CCDC168Q8NDH2 AC139713.2-207ENST00000641556 1292 ntBASIC12.1□□□□□ -0.47
CCDC168Q8NDH2 ZNF691-201ENST00000372502 1910 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
CCDC168Q8NDH2 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CCDC168Q8NDH2 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC12.1□□□□□ -0.47
CCDC168Q8NDH2 MYO9A-202ENST00000424560 4008 ntTSL 5 BASIC12.1□□□□□ -0.47
CCDC168Q8NDH2 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CCDC168Q8NDH2 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
CCDC168Q8NDH2 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
CCDC168Q8NDH2 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CCDC168Q8NDH2 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
CCDC168Q8NDH2 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CCDC168Q8NDH2 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
CCDC168Q8NDH2 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
CCDC168Q8NDH2 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC12.09□□□□□ -0.47
CCDC168Q8NDH2 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
CCDC168Q8NDH2 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
CCDC168Q8NDH2 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CCDC168Q8NDH2 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
CCDC168Q8NDH2 AIFM1-203ENST00000346424 1200 ntTSL 2 BASIC12.09□□□□□ -0.47
CCDC168Q8NDH2 NDUFB6-202ENST00000366466 761 ntTSL 2 BASIC12.09□□□□□ -0.47
CCDC168Q8NDH2 OR51A9P-201ENST00000422578 911 ntBASIC12.09□□□□□ -0.47
CCDC168Q8NDH2 AC006328.1-201ENST00000437571 379 ntBASIC12.09□□□□□ -0.47
CCDC168Q8NDH2 AC025186.1-201ENST00000478174 870 ntBASIC12.09□□□□□ -0.47
CCDC168Q8NDH2 EHF-208ENST00000530286 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CCDC168Q8NDH2 AC131206.1-201ENST00000538078 1211 ntBASIC12.09□□□□□ -0.47
CCDC168Q8NDH2 MT1G-203ENST00000568675 628 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CCDC168Q8NDH2 ZNF737-204ENST00000596797 569 ntTSL 4 BASIC12.09□□□□□ -0.47
CCDC168Q8NDH2 AL353658.2-201ENST00000629794 519 ntTSL 5 BASIC12.09□□□□□ -0.47
CCDC168Q8NDH2 AL357143.1-203ENST00000639750 881 ntBASIC12.09□□□□□ -0.47
CCDC168Q8NDH2 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC12.09□□□□□ -0.47
CCDC168Q8NDH2 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
CCDC168Q8NDH2 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CCDC168Q8NDH2 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CCDC168Q8NDH2 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
CCDC168Q8NDH2 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC12.09□□□□□ -0.47
CCDC168Q8NDH2 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
CCDC168Q8NDH2 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC12.09□□□□□ -0.47
CCDC168Q8NDH2 AC090616.6-203ENST00000579186 1945 ntBASIC12.09□□□□□ -0.47
CCDC168Q8NDH2 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
CCDC168Q8NDH2 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC12.09□□□□□ -0.47
CCDC168Q8NDH2 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
CCDC168Q8NDH2 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
CCDC168Q8NDH2 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC12.09□□□□□ -0.47
CCDC168Q8NDH2 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms