Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SCUBE3Q8IX30 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SCUBE3Q8IX30 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
SCUBE3Q8IX30 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC15.43■□□□□ 0.06
SCUBE3Q8IX30 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
SCUBE3Q8IX30 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC15.43■□□□□ 0.06
SCUBE3Q8IX30 LINC01230-201ENST00000625222 3017 ntBASIC15.43■□□□□ 0.06
SCUBE3Q8IX30 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SCUBE3Q8IX30 AMT-239ENST00000636865 1914 ntTSL 5 BASIC15.43■□□□□ 0.06
SCUBE3Q8IX30 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SCUBE3Q8IX30 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
SCUBE3Q8IX30 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SCUBE3Q8IX30 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SCUBE3Q8IX30 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC15.42■□□□□ 0.06
SCUBE3Q8IX30 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SCUBE3Q8IX30 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SCUBE3Q8IX30 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SCUBE3Q8IX30 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
SCUBE3Q8IX30 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC15.42■□□□□ 0.06
SCUBE3Q8IX30 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
SCUBE3Q8IX30 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC15.42■□□□□ 0.06
SCUBE3Q8IX30 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC15.42■□□□□ 0.06
SCUBE3Q8IX30 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC15.42■□□□□ 0.06
SCUBE3Q8IX30 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC15.42■□□□□ 0.06
SCUBE3Q8IX30 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC15.42■□□□□ 0.06
SCUBE3Q8IX30 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SCUBE3Q8IX30 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SCUBE3Q8IX30 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
SCUBE3Q8IX30 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SCUBE3Q8IX30 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SCUBE3Q8IX30 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SCUBE3Q8IX30 MIR663B-201ENST00000408361 115 ntBASIC15.42■□□□□ 0.06
SCUBE3Q8IX30 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC15.42■□□□□ 0.06
SCUBE3Q8IX30 HNRNPA1P63-201ENST00000427917 963 ntBASIC15.42■□□□□ 0.06
SCUBE3Q8IX30 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC15.42■□□□□ 0.06
SCUBE3Q8IX30 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SCUBE3Q8IX30 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SCUBE3Q8IX30 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC15.42■□□□□ 0.06
SCUBE3Q8IX30 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC15.42■□□□□ 0.06
SCUBE3Q8IX30 ARL16-210ENST00000574938 751 ntTSL 2 BASIC15.42■□□□□ 0.06
SCUBE3Q8IX30 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC15.42■□□□□ 0.06
SCUBE3Q8IX30 RN7SL190P-201ENST00000582519 257 ntBASIC15.42■□□□□ 0.06
SCUBE3Q8IX30 MIR6720-201ENST00000611664 98 ntBASIC15.42■□□□□ 0.06
SCUBE3Q8IX30 PRKN-211ENST00000615065 261 ntTSL 5 BASIC15.42■□□□□ 0.06
SCUBE3Q8IX30 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC15.42■□□□□ 0.06
SCUBE3Q8IX30 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SCUBE3Q8IX30 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SCUBE3Q8IX30 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SCUBE3Q8IX30 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SCUBE3Q8IX30 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SCUBE3Q8IX30 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC15.42■□□□□ 0.06
SCUBE3Q8IX30 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SCUBE3Q8IX30 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SCUBE3Q8IX30 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SCUBE3Q8IX30 AC009093.10-201ENST00000641956 1442 ntBASIC15.42■□□□□ 0.06
SCUBE3Q8IX30 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SCUBE3Q8IX30 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
SCUBE3Q8IX30 ADK-205ENST00000539909 1866 ntTSL 2 BASIC15.42■□□□□ 0.06
SCUBE3Q8IX30 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SCUBE3Q8IX30 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SCUBE3Q8IX30 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
SCUBE3Q8IX30 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SCUBE3Q8IX30 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SCUBE3Q8IX30 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC15.41■□□□□ 0.06
SCUBE3Q8IX30 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SCUBE3Q8IX30 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SCUBE3Q8IX30 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SCUBE3Q8IX30 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC15.41■□□□□ 0.06
SCUBE3Q8IX30 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SCUBE3Q8IX30 FAS-202ENST00000352159 1722 ntTSL 5 BASIC15.41■□□□□ 0.06
SCUBE3Q8IX30 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
SCUBE3Q8IX30 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
SCUBE3Q8IX30 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
SCUBE3Q8IX30 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
SCUBE3Q8IX30 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC15.41■□□□□ 0.06
SCUBE3Q8IX30 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC15.41■□□□□ 0.06
SCUBE3Q8IX30 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC15.41■□□□□ 0.06
SCUBE3Q8IX30 AC021723.1-201ENST00000486306 515 ntBASIC15.41■□□□□ 0.06
SCUBE3Q8IX30 HNRNPA1P36-201ENST00000521313 955 ntBASIC15.41■□□□□ 0.06
SCUBE3Q8IX30 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC15.41■□□□□ 0.06
SCUBE3Q8IX30 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC15.41■□□□□ 0.06
SCUBE3Q8IX30 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC15.41■□□□□ 0.06
SCUBE3Q8IX30 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC15.41■□□□□ 0.06
SCUBE3Q8IX30 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC15.41■□□□□ 0.06
SCUBE3Q8IX30 AL139099.5-201ENST00000635274 300 ntBASIC15.41■□□□□ 0.06
SCUBE3Q8IX30 TMBIM7P-202ENST00000641474 1516 ntBASIC15.41■□□□□ 0.06
SCUBE3Q8IX30 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SCUBE3Q8IX30 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
SCUBE3Q8IX30 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SCUBE3Q8IX30 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SCUBE3Q8IX30 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SCUBE3Q8IX30 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC15.41■□□□□ 0.06
SCUBE3Q8IX30 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SCUBE3Q8IX30 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
SCUBE3Q8IX30 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SCUBE3Q8IX30 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC15.41■□□□□ 0.06
SCUBE3Q8IX30 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
SCUBE3Q8IX30 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
SCUBE3Q8IX30 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC15.4■□□□□ 0.06
SCUBE3Q8IX30 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms