Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC15.5■□□□□ 0.07
NPAS4Q8IUM7 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
NPAS4Q8IUM7 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC15.5■□□□□ 0.07
NPAS4Q8IUM7 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NPAS4Q8IUM7 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC15.5■□□□□ 0.07
NPAS4Q8IUM7 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
NPAS4Q8IUM7 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NPAS4Q8IUM7 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NPAS4Q8IUM7 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC15.5■□□□□ 0.07
NPAS4Q8IUM7 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NPAS4Q8IUM7 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
NPAS4Q8IUM7 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC15.5■□□□□ 0.07
NPAS4Q8IUM7 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
NPAS4Q8IUM7 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
NPAS4Q8IUM7 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NPAS4Q8IUM7 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
NPAS4Q8IUM7 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NPAS4Q8IUM7 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NPAS4Q8IUM7 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NPAS4Q8IUM7 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC15.49■□□□□ 0.07
NPAS4Q8IUM7 LINC00528-201ENST00000600723 2160 ntBASIC15.49■□□□□ 0.07
NPAS4Q8IUM7 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NPAS4Q8IUM7 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC15.49■□□□□ 0.07
NPAS4Q8IUM7 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC15.49■□□□□ 0.07
NPAS4Q8IUM7 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
NPAS4Q8IUM7 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC15.49■□□□□ 0.07
NPAS4Q8IUM7 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC15.49■□□□□ 0.07
NPAS4Q8IUM7 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NPAS4Q8IUM7 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NPAS4Q8IUM7 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC15.49■□□□□ 0.07
NPAS4Q8IUM7 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
NPAS4Q8IUM7 USP4-203ENST00000415188 1454 ntTSL 3 BASIC15.49■□□□□ 0.07
NPAS4Q8IUM7 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NPAS4Q8IUM7 CCDC167-201ENST00000373408 619 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NPAS4Q8IUM7 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC15.49■□□□□ 0.07
NPAS4Q8IUM7 CSNK1G2P1-201ENST00000442675 955 ntBASIC15.49■□□□□ 0.07
NPAS4Q8IUM7 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
NPAS4Q8IUM7 REEP5-205ENST00000504247 480 ntTSL 5 BASIC15.49■□□□□ 0.07
NPAS4Q8IUM7 LINC00634-202ENST00000505157 222 ntBASIC15.49■□□□□ 0.07
NPAS4Q8IUM7 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC15.49■□□□□ 0.07
NPAS4Q8IUM7 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC15.49■□□□□ 0.07
NPAS4Q8IUM7 AC068867.1-201ENST00000559855 150 ntBASIC15.49■□□□□ 0.07
NPAS4Q8IUM7 RN7SL357P-201ENST00000581065 298 ntBASIC15.49■□□□□ 0.07
NPAS4Q8IUM7 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC15.49■□□□□ 0.07
NPAS4Q8IUM7 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
NPAS4Q8IUM7 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
NPAS4Q8IUM7 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NPAS4Q8IUM7 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC15.49■□□□□ 0.07
NPAS4Q8IUM7 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC15.49■□□□□ 0.07
NPAS4Q8IUM7 MX1-218ENST00000619682 1980 ntTSL 5 BASIC15.49■□□□□ 0.07
NPAS4Q8IUM7 AC105917.1-201ENST00000506637 2539 ntBASIC15.49■□□□□ 0.07
NPAS4Q8IUM7 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
NPAS4Q8IUM7 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
NPAS4Q8IUM7 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
NPAS4Q8IUM7 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
NPAS4Q8IUM7 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
NPAS4Q8IUM7 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
NPAS4Q8IUM7 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC15.48■□□□□ 0.07
NPAS4Q8IUM7 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
NPAS4Q8IUM7 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
NPAS4Q8IUM7 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
NPAS4Q8IUM7 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
NPAS4Q8IUM7 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
NPAS4Q8IUM7 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
NPAS4Q8IUM7 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC15.48■□□□□ 0.07
NPAS4Q8IUM7 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
NPAS4Q8IUM7 AL161932.2-201ENST00000435436 679 ntBASIC15.48■□□□□ 0.07
NPAS4Q8IUM7 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
NPAS4Q8IUM7 IZUMO1R-202ENST00000440961 805 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
NPAS4Q8IUM7 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC15.48■□□□□ 0.07
NPAS4Q8IUM7 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC15.48■□□□□ 0.07
NPAS4Q8IUM7 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC15.48■□□□□ 0.07
NPAS4Q8IUM7 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC15.48■□□□□ 0.07
NPAS4Q8IUM7 NDUFB10P1-201ENST00000567319 521 ntBASIC15.48■□□□□ 0.07
NPAS4Q8IUM7 MIR4472-1-201ENST00000584349 80 ntBASIC15.48■□□□□ 0.07
NPAS4Q8IUM7 AC005357.2-202ENST00000590507 1060 ntBASIC15.48■□□□□ 0.07
NPAS4Q8IUM7 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC15.48■□□□□ 0.07
NPAS4Q8IUM7 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
NPAS4Q8IUM7 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
NPAS4Q8IUM7 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC15.48■□□□□ 0.07
NPAS4Q8IUM7 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
NPAS4Q8IUM7 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
NPAS4Q8IUM7 AC067930.6-201ENST00000623257 4947 ntBASIC15.48■□□□□ 0.07
NPAS4Q8IUM7 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC15.48■□□□□ 0.07
NPAS4Q8IUM7 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC15.48■□□□□ 0.07
NPAS4Q8IUM7 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
NPAS4Q8IUM7 AL591122.2-201ENST00000624125 1853 ntBASIC15.48■□□□□ 0.07
NPAS4Q8IUM7 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC15.48■□□□□ 0.07
NPAS4Q8IUM7 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
NPAS4Q8IUM7 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
NPAS4Q8IUM7 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
NPAS4Q8IUM7 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC15.48■□□□□ 0.07
NPAS4Q8IUM7 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
NPAS4Q8IUM7 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC15.47■□□□□ 0.07
NPAS4Q8IUM7 AC132872.4-202ENST00000622924 2756 ntBASIC15.47■□□□□ 0.07
NPAS4Q8IUM7 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
NPAS4Q8IUM7 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
NPAS4Q8IUM7 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
NPAS4Q8IUM7 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
NPAS4Q8IUM7 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC15.47■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms