Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC13.12□□□□□ -0.31
LRRC28Q86X40 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LRRC28Q86X40 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
LRRC28Q86X40 CYP2AB1P-202ENST00000454440 1456 ntBASIC13.12□□□□□ -0.31
LRRC28Q86X40 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
LRRC28Q86X40 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC13.12□□□□□ -0.31
LRRC28Q86X40 AC114271.1-201ENST00000612689 2813 ntBASIC13.12□□□□□ -0.31
LRRC28Q86X40 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LRRC28Q86X40 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
LRRC28Q86X40 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
LRRC28Q86X40 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
LRRC28Q86X40 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
LRRC28Q86X40 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC13.12□□□□□ -0.31
LRRC28Q86X40 COX5BP8-201ENST00000416911 349 ntBASIC13.12□□□□□ -0.31
LRRC28Q86X40 AC098850.1-201ENST00000419919 790 ntBASIC13.12□□□□□ -0.31
LRRC28Q86X40 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC13.12□□□□□ -0.31
LRRC28Q86X40 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC13.12□□□□□ -0.31
LRRC28Q86X40 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC13.12□□□□□ -0.31
LRRC28Q86X40 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC13.12□□□□□ -0.31
LRRC28Q86X40 RN7SL752P-201ENST00000463779 287 ntBASIC13.12□□□□□ -0.31
LRRC28Q86X40 FAM86LP-201ENST00000478302 853 ntBASIC13.12□□□□□ -0.31
LRRC28Q86X40 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC13.12□□□□□ -0.31
LRRC28Q86X40 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC13.12□□□□□ -0.31
LRRC28Q86X40 AC092552.1-201ENST00000547243 906 ntBASIC13.12□□□□□ -0.31
LRRC28Q86X40 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC13.12□□□□□ -0.31
LRRC28Q86X40 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC13.12□□□□□ -0.31
LRRC28Q86X40 CTBP2P3-201ENST00000585629 1255 ntBASIC13.12□□□□□ -0.31
LRRC28Q86X40 TBCB-211ENST00000589996 724 ntTSL 3 BASIC13.12□□□□□ -0.31
LRRC28Q86X40 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC13.12□□□□□ -0.31
LRRC28Q86X40 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC13.12□□□□□ -0.31
LRRC28Q86X40 AL035252.4-201ENST00000624174 288 ntBASIC13.12□□□□□ -0.31
LRRC28Q86X40 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
LRRC28Q86X40 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC13.12□□□□□ -0.31
LRRC28Q86X40 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LRRC28Q86X40 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
LRRC28Q86X40 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
LRRC28Q86X40 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
LRRC28Q86X40 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LRRC28Q86X40 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LRRC28Q86X40 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
LRRC28Q86X40 AC012617.1-204ENST00000586340 2305 ntBASIC13.12□□□□□ -0.31
LRRC28Q86X40 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
LRRC28Q86X40 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LRRC28Q86X40 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC13.12□□□□□ -0.31
LRRC28Q86X40 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LRRC28Q86X40 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LRRC28Q86X40 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
LRRC28Q86X40 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC13.12□□□□□ -0.31
LRRC28Q86X40 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
LRRC28Q86X40 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LRRC28Q86X40 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LRRC28Q86X40 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC13.12□□□□□ -0.31
LRRC28Q86X40 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
LRRC28Q86X40 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
LRRC28Q86X40 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LRRC28Q86X40 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC13.11□□□□□ -0.31
LRRC28Q86X40 PEG13-201ENST00000631594 5667 ntBASIC13.11□□□□□ -0.31
LRRC28Q86X40 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC13.11□□□□□ -0.31
LRRC28Q86X40 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LRRC28Q86X40 TP73-207ENST00000378290 1831 ntTSL 2 BASIC13.11□□□□□ -0.31
LRRC28Q86X40 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC13.11□□□□□ -0.31
LRRC28Q86X40 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LRRC28Q86X40 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LRRC28Q86X40 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC13.11□□□□□ -0.31
LRRC28Q86X40 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC13.11□□□□□ -0.31
LRRC28Q86X40 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LRRC28Q86X40 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
LRRC28Q86X40 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LRRC28Q86X40 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC13.11□□□□□ -0.31
LRRC28Q86X40 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LRRC28Q86X40 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
LRRC28Q86X40 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LRRC28Q86X40 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LRRC28Q86X40 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LRRC28Q86X40 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LRRC28Q86X40 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
LRRC28Q86X40 KRT18P43-201ENST00000469825 1281 ntBASIC13.11□□□□□ -0.31
LRRC28Q86X40 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LRRC28Q86X40 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
LRRC28Q86X40 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
LRRC28Q86X40 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
LRRC28Q86X40 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LRRC28Q86X40 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC13.11□□□□□ -0.31
LRRC28Q86X40 AC239800.4-201ENST00000603712 296 ntBASIC13.11□□□□□ -0.31
LRRC28Q86X40 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LRRC28Q86X40 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LRRC28Q86X40 CR383656.2-201ENST00000548656 2254 ntBASIC13.11□□□□□ -0.31
LRRC28Q86X40 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LRRC28Q86X40 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
LRRC28Q86X40 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LRRC28Q86X40 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LRRC28Q86X40 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
LRRC28Q86X40 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
LRRC28Q86X40 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
LRRC28Q86X40 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LRRC28Q86X40 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
LRRC28Q86X40 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC13.11□□□□□ -0.31
LRRC28Q86X40 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
LRRC28Q86X40 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
LRRC28Q86X40 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms