Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ATG4DQ86TL0 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
ATG4DQ86TL0 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ATG4DQ86TL0 AC011474.4-201ENST00000623523 2076 ntBASIC13.28□□□□□ -0.28
ATG4DQ86TL0 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ATG4DQ86TL0 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
ATG4DQ86TL0 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC13.28□□□□□ -0.28
ATG4DQ86TL0 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ATG4DQ86TL0 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
ATG4DQ86TL0 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ATG4DQ86TL0 MST1P2-201ENST00000457982 2291 ntBASIC13.28□□□□□ -0.28
ATG4DQ86TL0 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
ATG4DQ86TL0 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
ATG4DQ86TL0 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ATG4DQ86TL0 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ATG4DQ86TL0 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC13.28□□□□□ -0.28
ATG4DQ86TL0 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ATG4DQ86TL0 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
ATG4DQ86TL0 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ATG4DQ86TL0 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ATG4DQ86TL0 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
ATG4DQ86TL0 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
ATG4DQ86TL0 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ATG4DQ86TL0 HNRNPA1P27-201ENST00000412087 955 ntBASIC13.28□□□□□ -0.28
ATG4DQ86TL0 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC13.28□□□□□ -0.28
ATG4DQ86TL0 SKA2-202ENST00000437036 625 ntTSL 2 BASIC13.28□□□□□ -0.28
ATG4DQ86TL0 HOMER2P2-201ENST00000451621 847 ntBASIC13.28□□□□□ -0.28
ATG4DQ86TL0 NCK2-206ENST00000522586 490 ntTSL 5 BASIC13.28□□□□□ -0.28
ATG4DQ86TL0 PACS1-203ENST00000524815 628 ntTSL 4 BASIC13.28□□□□□ -0.28
ATG4DQ86TL0 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC13.28□□□□□ -0.28
ATG4DQ86TL0 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC13.28□□□□□ -0.28
ATG4DQ86TL0 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC13.28□□□□□ -0.28
ATG4DQ86TL0 AP006547.1-201ENST00000563435 692 ntBASIC13.28□□□□□ -0.28
ATG4DQ86TL0 AC005586.2-201ENST00000563946 837 ntBASIC13.28□□□□□ -0.28
ATG4DQ86TL0 HNRNPA1P48-202ENST00000565308 961 ntBASIC13.28□□□□□ -0.28
ATG4DQ86TL0 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC13.28□□□□□ -0.28
ATG4DQ86TL0 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC13.28□□□□□ -0.28
ATG4DQ86TL0 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ATG4DQ86TL0 AC008687.7-202ENST00000637404 953 ntBASIC13.28□□□□□ -0.28
ATG4DQ86TL0 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ATG4DQ86TL0 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC13.28□□□□□ -0.28
ATG4DQ86TL0 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ATG4DQ86TL0 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ATG4DQ86TL0 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ATG4DQ86TL0 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC13.28□□□□□ -0.28
ATG4DQ86TL0 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ATG4DQ86TL0 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
ATG4DQ86TL0 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC13.28□□□□□ -0.28
ATG4DQ86TL0 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
ATG4DQ86TL0 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ATG4DQ86TL0 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC13.28□□□□□ -0.28
ATG4DQ86TL0 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ATG4DQ86TL0 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
ATG4DQ86TL0 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC13.28□□□□□ -0.28
ATG4DQ86TL0 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
ATG4DQ86TL0 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ATG4DQ86TL0 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ATG4DQ86TL0 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ATG4DQ86TL0 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC13.27□□□□□ -0.28
ATG4DQ86TL0 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
ATG4DQ86TL0 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
ATG4DQ86TL0 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.28
ATG4DQ86TL0 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
ATG4DQ86TL0 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC13.27□□□□□ -0.28
ATG4DQ86TL0 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
ATG4DQ86TL0 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC13.27□□□□□ -0.28
ATG4DQ86TL0 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC13.27□□□□□ -0.28
ATG4DQ86TL0 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
ATG4DQ86TL0 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC13.27□□□□□ -0.28
ATG4DQ86TL0 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.28
ATG4DQ86TL0 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC13.27□□□□□ -0.28
ATG4DQ86TL0 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
ATG4DQ86TL0 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC13.27□□□□□ -0.29
ATG4DQ86TL0 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ATG4DQ86TL0 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC13.27□□□□□ -0.29
ATG4DQ86TL0 RBM38-204ENST00000371219 760 ntTSL 2 BASIC13.27□□□□□ -0.29
ATG4DQ86TL0 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC13.27□□□□□ -0.29
ATG4DQ86TL0 TPO-206ENST00000382269 1155 ntTSL 5 BASIC13.27□□□□□ -0.29
ATG4DQ86TL0 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC13.27□□□□□ -0.29
ATG4DQ86TL0 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC13.27□□□□□ -0.29
ATG4DQ86TL0 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC13.27□□□□□ -0.29
ATG4DQ86TL0 FAM21FP-201ENST00000426241 1131 ntBASIC13.27□□□□□ -0.29
ATG4DQ86TL0 AL161932.2-201ENST00000435436 679 ntBASIC13.27□□□□□ -0.29
ATG4DQ86TL0 ACTBP11-201ENST00000436287 1126 ntBASIC13.27□□□□□ -0.29
ATG4DQ86TL0 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC13.27□□□□□ -0.29
ATG4DQ86TL0 RPL13AP20-201ENST00000459725 609 ntBASIC13.27□□□□□ -0.29
ATG4DQ86TL0 AC022494.1-201ENST00000466044 728 ntBASIC13.27□□□□□ -0.29
ATG4DQ86TL0 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
ATG4DQ86TL0 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
ATG4DQ86TL0 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC13.27□□□□□ -0.29
ATG4DQ86TL0 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC13.27□□□□□ -0.29
ATG4DQ86TL0 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
ATG4DQ86TL0 AC023310.1-201ENST00000554836 735 ntBASIC13.27□□□□□ -0.29
ATG4DQ86TL0 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
ATG4DQ86TL0 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
ATG4DQ86TL0 RN7SL219P-201ENST00000582872 296 ntBASIC13.27□□□□□ -0.29
ATG4DQ86TL0 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC13.27□□□□□ -0.29
ATG4DQ86TL0 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC13.27□□□□□ -0.29
ATG4DQ86TL0 GPR182-203ENST00000622922 591 ntBASIC13.27□□□□□ -0.29
ATG4DQ86TL0 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms