Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
LYSMD3Q7Z3D4 KRT8P28-201ENST00000433288 1390 ntBASIC14.75□□□□□ -0.05
LYSMD3Q7Z3D4 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
LYSMD3Q7Z3D4 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LYSMD3Q7Z3D4 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LYSMD3Q7Z3D4 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC14.75□□□□□ -0.05
LYSMD3Q7Z3D4 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LYSMD3Q7Z3D4 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
LYSMD3Q7Z3D4 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
LYSMD3Q7Z3D4 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
LYSMD3Q7Z3D4 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
LYSMD3Q7Z3D4 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LYSMD3Q7Z3D4 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LYSMD3Q7Z3D4 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC14.75□□□□□ -0.05
LYSMD3Q7Z3D4 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
LYSMD3Q7Z3D4 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
LYSMD3Q7Z3D4 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC14.75□□□□□ -0.05
LYSMD3Q7Z3D4 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LYSMD3Q7Z3D4 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LYSMD3Q7Z3D4 FAM86MP-201ENST00000340703 885 ntBASIC14.75□□□□□ -0.05
LYSMD3Q7Z3D4 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
LYSMD3Q7Z3D4 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC14.75□□□□□ -0.05
LYSMD3Q7Z3D4 AK6-201ENST00000380818 1183 ntTSL 2 BASIC14.75□□□□□ -0.05
LYSMD3Q7Z3D4 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC14.75□□□□□ -0.05
LYSMD3Q7Z3D4 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC14.75□□□□□ -0.05
LYSMD3Q7Z3D4 HSPB1P2-201ENST00000448722 546 ntBASIC14.75□□□□□ -0.05
LYSMD3Q7Z3D4 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC14.75□□□□□ -0.05
LYSMD3Q7Z3D4 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC14.75□□□□□ -0.05
LYSMD3Q7Z3D4 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
LYSMD3Q7Z3D4 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
LYSMD3Q7Z3D4 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LYSMD3Q7Z3D4 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC14.75□□□□□ -0.05
LYSMD3Q7Z3D4 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC14.75□□□□□ -0.05
LYSMD3Q7Z3D4 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC14.75□□□□□ -0.05
LYSMD3Q7Z3D4 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LYSMD3Q7Z3D4 RN7SL275P-201ENST00000582762 335 ntBASIC14.75□□□□□ -0.05
LYSMD3Q7Z3D4 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC14.75□□□□□ -0.05
LYSMD3Q7Z3D4 AC027601.3-201ENST00000622907 509 ntBASIC14.75□□□□□ -0.05
LYSMD3Q7Z3D4 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC14.75□□□□□ -0.05
LYSMD3Q7Z3D4 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LYSMD3Q7Z3D4 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC14.75□□□□□ -0.05
LYSMD3Q7Z3D4 MVK-214ENST00000629016 1591 ntTSL 5 BASIC14.75□□□□□ -0.05
LYSMD3Q7Z3D4 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LYSMD3Q7Z3D4 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
LYSMD3Q7Z3D4 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
LYSMD3Q7Z3D4 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LYSMD3Q7Z3D4 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
LYSMD3Q7Z3D4 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC14.75□□□□□ -0.05
LYSMD3Q7Z3D4 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
LYSMD3Q7Z3D4 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
LYSMD3Q7Z3D4 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LYSMD3Q7Z3D4 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
LYSMD3Q7Z3D4 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LYSMD3Q7Z3D4 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
LYSMD3Q7Z3D4 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC14.74□□□□□ -0.05
LYSMD3Q7Z3D4 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LYSMD3Q7Z3D4 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
LYSMD3Q7Z3D4 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
LYSMD3Q7Z3D4 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
LYSMD3Q7Z3D4 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LYSMD3Q7Z3D4 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC14.74□□□□□ -0.05
LYSMD3Q7Z3D4 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
LYSMD3Q7Z3D4 RBM38-204ENST00000371219 760 ntTSL 2 BASIC14.74□□□□□ -0.05
LYSMD3Q7Z3D4 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
LYSMD3Q7Z3D4 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LYSMD3Q7Z3D4 BTBD6P1-201ENST00000412176 1267 ntBASIC14.74□□□□□ -0.05
LYSMD3Q7Z3D4 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC14.74□□□□□ -0.05
LYSMD3Q7Z3D4 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC14.74□□□□□ -0.05
LYSMD3Q7Z3D4 FAM8A2P-201ENST00000528813 1142 ntBASIC14.74□□□□□ -0.05
LYSMD3Q7Z3D4 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC14.74□□□□□ -0.05
LYSMD3Q7Z3D4 NOP2-211ENST00000540228 668 ntTSL 2 BASIC14.74□□□□□ -0.05
LYSMD3Q7Z3D4 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
LYSMD3Q7Z3D4 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LYSMD3Q7Z3D4 DUX4L46-201ENST00000566845 751 ntBASIC14.74□□□□□ -0.05
LYSMD3Q7Z3D4 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC14.74□□□□□ -0.05
LYSMD3Q7Z3D4 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LYSMD3Q7Z3D4 DERL2-202ENST00000570848 657 ntTSL 5 BASIC14.74□□□□□ -0.05
LYSMD3Q7Z3D4 MIR4525-201ENST00000580000 75 ntBASIC14.74□□□□□ -0.05
LYSMD3Q7Z3D4 AC132192.2-201ENST00000596206 1147 ntBASIC14.74□□□□□ -0.05
LYSMD3Q7Z3D4 AC009955.4-201ENST00000597192 544 ntBASIC14.74□□□□□ -0.05
LYSMD3Q7Z3D4 KLK3-211ENST00000597483 810 ntTSL 2 BASIC14.74□□□□□ -0.05
LYSMD3Q7Z3D4 AL096828.3-201ENST00000615354 462 ntBASIC14.74□□□□□ -0.05
LYSMD3Q7Z3D4 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC14.74□□□□□ -0.05
LYSMD3Q7Z3D4 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
LYSMD3Q7Z3D4 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC14.74□□□□□ -0.05
LYSMD3Q7Z3D4 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
LYSMD3Q7Z3D4 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LYSMD3Q7Z3D4 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LYSMD3Q7Z3D4 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC14.74□□□□□ -0.05
LYSMD3Q7Z3D4 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LYSMD3Q7Z3D4 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LYSMD3Q7Z3D4 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LYSMD3Q7Z3D4 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
LYSMD3Q7Z3D4 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
LYSMD3Q7Z3D4 RDX-218ENST00000544551 4117 ntTSL 2 BASIC14.74□□□□□ -0.05
LYSMD3Q7Z3D4 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC14.74□□□□□ -0.05
LYSMD3Q7Z3D4 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LYSMD3Q7Z3D4 BEND3P1-201ENST00000421591 1944 ntBASIC14.74□□□□□ -0.05
LYSMD3Q7Z3D4 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LYSMD3Q7Z3D4 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms