Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 GHSR-202ENST00000427970 912 ntBASIC12.91□□□□□ -0.34
C11orf88Q6PI97 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
C11orf88Q6PI97 AC244107.1-201ENST00000442033 332 ntBASIC12.91□□□□□ -0.34
C11orf88Q6PI97 HNRNPA3P5-201ENST00000455201 833 ntBASIC12.91□□□□□ -0.34
C11orf88Q6PI97 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
C11orf88Q6PI97 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC12.91□□□□□ -0.34
C11orf88Q6PI97 CFL1-212ENST00000531413 636 ntTSL 3 BASIC12.91□□□□□ -0.34
C11orf88Q6PI97 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC12.91□□□□□ -0.34
C11orf88Q6PI97 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
C11orf88Q6PI97 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC12.91□□□□□ -0.34
C11orf88Q6PI97 AC005225.4-201ENST00000557330 545 ntBASIC12.91□□□□□ -0.34
C11orf88Q6PI97 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
C11orf88Q6PI97 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
C11orf88Q6PI97 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
C11orf88Q6PI97 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC12.91□□□□□ -0.34
C11orf88Q6PI97 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
C11orf88Q6PI97 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC12.91□□□□□ -0.34
C11orf88Q6PI97 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
C11orf88Q6PI97 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
C11orf88Q6PI97 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
C11orf88Q6PI97 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
C11orf88Q6PI97 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC12.91□□□□□ -0.34
C11orf88Q6PI97 IRF2BPL-201ENST00000238647 4157 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
C11orf88Q6PI97 ANKRD26-202ENST00000436985 6827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
C11orf88Q6PI97 VAMP4-201ENST00000236192 5159 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
C11orf88Q6PI97 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
C11orf88Q6PI97 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
C11orf88Q6PI97 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
C11orf88Q6PI97 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
C11orf88Q6PI97 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
C11orf88Q6PI97 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC12.91□□□□□ -0.34
C11orf88Q6PI97 AC138969.3-201ENST00000546612 1459 ntBASIC12.91□□□□□ -0.34
C11orf88Q6PI97 AC138932.2-201ENST00000548268 1459 ntBASIC12.91□□□□□ -0.34
C11orf88Q6PI97 AC126755.4-201ENST00000549796 1459 ntBASIC12.91□□□□□ -0.34
C11orf88Q6PI97 AC006001.3-201ENST00000449307 7092 ntTSL 3 BASIC12.91□□□□□ -0.34
C11orf88Q6PI97 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
C11orf88Q6PI97 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
C11orf88Q6PI97 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
C11orf88Q6PI97 MYO9B-201ENST00000397274 7532 ntTSL 5 BASIC12.9□□□□□ -0.34
C11orf88Q6PI97 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
C11orf88Q6PI97 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
C11orf88Q6PI97 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
C11orf88Q6PI97 AC087499.5-201ENST00000452760 1342 ntBASIC12.9□□□□□ -0.34
C11orf88Q6PI97 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
C11orf88Q6PI97 ARHGEF10L-202ENST00000361221 4488 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
C11orf88Q6PI97 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC12.9□□□□□ -0.34
C11orf88Q6PI97 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC12.9□□□□□ -0.34
C11orf88Q6PI97 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC12.9□□□□□ -0.34
C11orf88Q6PI97 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
C11orf88Q6PI97 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC12.9□□□□□ -0.34
C11orf88Q6PI97 SYNM-203ENST00000560674 5908 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
C11orf88Q6PI97 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
C11orf88Q6PI97 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
C11orf88Q6PI97 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
C11orf88Q6PI97 TWSG1-201ENST00000262120 3756 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
C11orf88Q6PI97 LRRC8A-203ENST00000372600 4355 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
C11orf88Q6PI97 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC12.9□□□□□ -0.34
C11orf88Q6PI97 TNRC6C-207ENST00000588847 8527 ntAPPRIS P4 TSL 5 BASIC12.9□□□□□ -0.34
C11orf88Q6PI97 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC12.9□□□□□ -0.34
C11orf88Q6PI97 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC12.9□□□□□ -0.34
C11orf88Q6PI97 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
C11orf88Q6PI97 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC12.9□□□□□ -0.34
C11orf88Q6PI97 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
C11orf88Q6PI97 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
C11orf88Q6PI97 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC12.9□□□□□ -0.34
C11orf88Q6PI97 AC015922.1-201ENST00000421102 1152 ntBASIC12.9□□□□□ -0.34
C11orf88Q6PI97 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
C11orf88Q6PI97 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC12.9□□□□□ -0.34
C11orf88Q6PI97 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC12.9□□□□□ -0.34
C11orf88Q6PI97 SERBP1P3-201ENST00000459980 809 ntBASIC12.9□□□□□ -0.34
C11orf88Q6PI97 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
C11orf88Q6PI97 SATB1-217ENST00000493952 626 ntTSL 3 BASIC12.9□□□□□ -0.34
C11orf88Q6PI97 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
C11orf88Q6PI97 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC12.9□□□□□ -0.34
C11orf88Q6PI97 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
C11orf88Q6PI97 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC12.9□□□□□ -0.34
C11orf88Q6PI97 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC12.9□□□□□ -0.34
C11orf88Q6PI97 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
C11orf88Q6PI97 AC004233.3-201ENST00000607794 1269 ntBASIC12.9□□□□□ -0.34
C11orf88Q6PI97 AC012645.4-201ENST00000610691 1061 ntBASIC12.9□□□□□ -0.34
C11orf88Q6PI97 SRGAP3-202ENST00000383836 8656 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
C11orf88Q6PI97 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
C11orf88Q6PI97 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
C11orf88Q6PI97 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
C11orf88Q6PI97 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
C11orf88Q6PI97 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
C11orf88Q6PI97 OR4K13-203ENST00000641904 5684 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
C11orf88Q6PI97 DGCR2-201ENST00000263196 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
C11orf88Q6PI97 DGCR2-206ENST00000545799 4484 ntTSL 5 BASIC12.9□□□□□ -0.34
C11orf88Q6PI97 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
C11orf88Q6PI97 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC12.9□□□□□ -0.34
C11orf88Q6PI97 PITPNM3-202ENST00000421306 6945 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
C11orf88Q6PI97 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC12.9□□□□□ -0.34
C11orf88Q6PI97 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC12.9□□□□□ -0.34
C11orf88Q6PI97 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC12.9□□□□□ -0.34
C11orf88Q6PI97 EBF2-203ENST00000520164 5145 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
C11orf88Q6PI97 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
C11orf88Q6PI97 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
C11orf88Q6PI97 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
C11orf88Q6PI97 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms