Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
SCN1BQ07699 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC13.15□□□□□ -0.3
SCN1BQ07699 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SCN1BQ07699 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SCN1BQ07699 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SCN1BQ07699 LIPE-201ENST00000244289 3813 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SCN1BQ07699 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SCN1BQ07699 KLK8-202ENST00000320838 456 ntTSL 5 BASIC13.15□□□□□ -0.3
SCN1BQ07699 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SCN1BQ07699 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
SCN1BQ07699 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC13.15□□□□□ -0.3
SCN1BQ07699 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC13.15□□□□□ -0.3
SCN1BQ07699 HLA-J-203ENST00000494367 1087 ntBASIC13.15□□□□□ -0.3
SCN1BQ07699 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC13.15□□□□□ -0.3
SCN1BQ07699 AC027369.6-201ENST00000525520 931 ntBASIC13.15□□□□□ -0.3
SCN1BQ07699 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC13.15□□□□□ -0.3
SCN1BQ07699 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SCN1BQ07699 AL512356.2-201ENST00000546955 174 ntBASIC13.15□□□□□ -0.3
SCN1BQ07699 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
SCN1BQ07699 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC13.15□□□□□ -0.3
SCN1BQ07699 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
SCN1BQ07699 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SCN1BQ07699 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC13.15□□□□□ -0.3
SCN1BQ07699 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC13.15□□□□□ -0.3
SCN1BQ07699 AF228730.6-201ENST00000641497 218 ntBASIC13.15□□□□□ -0.3
SCN1BQ07699 AC084121.3-201ENST00000641716 218 ntBASIC13.15□□□□□ -0.3
SCN1BQ07699 PCGF2-202ENST00000611883 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SCN1BQ07699 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC13.15□□□□□ -0.3
SCN1BQ07699 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SCN1BQ07699 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC13.15□□□□□ -0.3
SCN1BQ07699 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
SCN1BQ07699 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
SCN1BQ07699 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SCN1BQ07699 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SCN1BQ07699 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
SCN1BQ07699 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SCN1BQ07699 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
SCN1BQ07699 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.31
SCN1BQ07699 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC13.14□□□□□ -0.31
SCN1BQ07699 SNED1-201ENST00000310397 8174 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
SCN1BQ07699 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC13.14□□□□□ -0.31
SCN1BQ07699 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC13.14□□□□□ -0.31
SCN1BQ07699 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
SCN1BQ07699 NME1-209ENST00000511355 1645 ntTSL 5 BASIC13.14□□□□□ -0.31
SCN1BQ07699 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SCN1BQ07699 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SCN1BQ07699 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC13.14□□□□□ -0.31
SCN1BQ07699 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SCN1BQ07699 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SCN1BQ07699 AL139400.1-201ENST00000366220 510 ntBASIC13.14□□□□□ -0.31
SCN1BQ07699 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SCN1BQ07699 AL080243.2-201ENST00000418783 582 ntBASIC13.14□□□□□ -0.31
SCN1BQ07699 KRT18P64-201ENST00000434946 1219 ntBASIC13.14□□□□□ -0.31
SCN1BQ07699 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC13.14□□□□□ -0.31
SCN1BQ07699 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SCN1BQ07699 RN7SL618P-201ENST00000477850 296 ntBASIC13.14□□□□□ -0.31
SCN1BQ07699 SLED1-202ENST00000512051 380 ntBASIC13.14□□□□□ -0.31
SCN1BQ07699 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC13.14□□□□□ -0.31
SCN1BQ07699 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC13.14□□□□□ -0.31
SCN1BQ07699 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC13.14□□□□□ -0.31
SCN1BQ07699 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC13.14□□□□□ -0.31
SCN1BQ07699 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SCN1BQ07699 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC13.14□□□□□ -0.31
SCN1BQ07699 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC13.14□□□□□ -0.31
SCN1BQ07699 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC13.14□□□□□ -0.31
SCN1BQ07699 GPER1-207ENST00000619052 571 ntTSL 2 BASIC13.14□□□□□ -0.31
SCN1BQ07699 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC13.14□□□□□ -0.31
SCN1BQ07699 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
SCN1BQ07699 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC13.14□□□□□ -0.31
SCN1BQ07699 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC13.14□□□□□ -0.31
SCN1BQ07699 AC012617.1-204ENST00000586340 2305 ntBASIC13.14□□□□□ -0.31
SCN1BQ07699 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SCN1BQ07699 ZBTB45P1-201ENST00000452761 1456 ntBASIC13.14□□□□□ -0.31
SCN1BQ07699 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SCN1BQ07699 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC13.14□□□□□ -0.31
SCN1BQ07699 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC13.14□□□□□ -0.31
SCN1BQ07699 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC13.14□□□□□ -0.31
SCN1BQ07699 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC13.14□□□□□ -0.31
SCN1BQ07699 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SCN1BQ07699 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SCN1BQ07699 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC13.14□□□□□ -0.31
SCN1BQ07699 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC13.14□□□□□ -0.31
SCN1BQ07699 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC13.14□□□□□ -0.31
SCN1BQ07699 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
SCN1BQ07699 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
SCN1BQ07699 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC13.14□□□□□ -0.31
SCN1BQ07699 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC13.14□□□□□ -0.31
SCN1BQ07699 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SCN1BQ07699 EML1-203ENST00000334192 4064 ntTSL 5 BASIC13.13□□□□□ -0.31
SCN1BQ07699 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SCN1BQ07699 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC13.13□□□□□ -0.31
SCN1BQ07699 NEK9-201ENST00000238616 8310 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SCN1BQ07699 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SCN1BQ07699 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC13.13□□□□□ -0.31
SCN1BQ07699 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC13.13□□□□□ -0.31
SCN1BQ07699 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC13.13□□□□□ -0.31
SCN1BQ07699 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SCN1BQ07699 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SCN1BQ07699 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SCN1BQ07699 ZNF862-201ENST00000223210 6950 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms